RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 FUCA2Q9BTY2 467 aa15.41■□□□□ 0.06
UBXN4-203ENST00000416538 SELENOOQ9BVL4 669 aa15.41■□□□□ 0.06
UBXN4-203ENST00000416538 TM6SF2Q9BZW4 377 aa15.41■□□□□ 0.06
UBXN4-203ENST00000416538 KLC2Q9H0B6 622 aa15.41■□□□□ 0.06
UBXN4-203ENST00000416538 PREBQ9HCU5 417 aa15.41■□□□□ 0.06
UBXN4-203ENST00000416538 RTN4Q9NQC3 1192 aaKnown RBP15.41■□□□□ 0.06
UBXN4-203ENST00000416538 IL36AQ9UHA7 158 aa15.41■□□□□ 0.06
UBXN4-203ENST00000416538 RALYQ9UKM9 306 aaKnown RBP15.41■□□□□ 0.06
UBXN4-203ENST00000416538 APOBEC2Q9Y235 224 aaKnown RBP15.41■□□□□ 0.06
UBXN4-203ENST00000416538 A0A1W2PQU0 124 aa15.4■□□□□ 0.06
UBXN4-203ENST00000416538 SIGLEC16A6NMB1 481 aa15.4■□□□□ 0.06
UBXN4-203ENST00000416538 TLR4O00206 839 aa15.4■□□□□ 0.06
UBXN4-203ENST00000416538 TAF4O00268 1085 aa15.4■□□□□ 0.06
UBXN4-203ENST00000416538 CALB1P05937 261 aa15.4■□□□□ 0.06
UBXN4-203ENST00000416538 PLEKP08567 350 aaPredicted RBP15.4■□□□□ 0.06
UBXN4-203ENST00000416538 RHOQP17081 205 aa15.4■□□□□ 0.06
UBXN4-203ENST00000416538 CDK11BP21127 795 aaKnown RBP15.4■□□□□ 0.06
UBXN4-203ENST00000416538 MAPKAPK2P49137 400 aa15.4■□□□□ 0.06
UBXN4-203ENST00000416538 CCNHP51946 323 aaPredicted RBP15.4■□□□□ 0.06
UBXN4-203ENST00000416538 CLDN6P56747 220 aa15.4■□□□□ 0.06
UBXN4-203ENST00000416538 BNIP3Q12983 259 aa15.4■□□□□ 0.06
UBXN4-203ENST00000416538 FGL2Q14314 439 aa15.4■□□□□ 0.06
UBXN4-203ENST00000416538 ZNF284Q2VY69 593 aa15.4■□□□□ 0.06
UBXN4-203ENST00000416538 SFMBT2Q5VUG0 894 aa15.4■□□□□ 0.06
UBXN4-203ENST00000416538 SEL1L3Q68CR1 1132 aa15.4■□□□□ 0.06
UBXN4-203ENST00000416538 DNAJC24Q6P3W2 148 aa15.4■□□□□ 0.06
UBXN4-203ENST00000416538 PARS2Q7L3T8 475 aaKnown RBP15.4■□□□□ 0.06
UBXN4-203ENST00000416538 MCOLN2Q8IZK6 566 aa15.4■□□□□ 0.06
UBXN4-203ENST00000416538 PCDH20Q8N6Y1 951 aaKnown RBP15.4■□□□□ 0.06
UBXN4-203ENST00000416538 MFSD2AQ8NA29 543 aa15.4■□□□□ 0.06
UBXN4-203ENST00000416538 NETO2Q8NC67 525 aa15.4■□□□□ 0.06
UBXN4-203ENST00000416538 TBC1D31Q96DN5 1066 aa15.4■□□□□ 0.06
UBXN4-203ENST00000416538 CEP44Q9C0F1 390 aa15.4■□□□□ 0.06
UBXN4-203ENST00000416538 GDF3Q9NR23 364 aa15.4■□□□□ 0.06
UBXN4-203ENST00000416538 SHROOM3Q8TF72 1996 aa15.4■□□□□ 0.06
UBXN4-203ENST00000416538 CELSR3Q9NYQ7 3312 aa15.39■□□□□ 0.05
UBXN4-203ENST00000416538 LRRC53A6NM62 1247 aa15.39■□□□□ 0.05
UBXN4-203ENST00000416538 SLC31A1O15431 190 aa15.39■□□□□ 0.05
UBXN4-203ENST00000416538 PRNPP04156 253 aa15.39■□□□□ 0.05
UBXN4-203ENST00000416538 ABL2P42684 1182 aa15.39■□□□□ 0.05
UBXN4-203ENST00000416538 ZNF143P52747 638 aaPredicted RBP15.39■□□□□ 0.05
UBXN4-203ENST00000416538 ARL13BQ3SXY8 428 aa15.39■□□□□ 0.05
UBXN4-203ENST00000416538 TMEM259Q4ZIN3 620 aa15.39■□□□□ 0.05
UBXN4-203ENST00000416538 SETMARQ53H47 684 aaPredicted RBP15.39■□□□□ 0.05
UBXN4-203ENST00000416538 RETSATQ6NUM9 610 aa15.39■□□□□ 0.05
UBXN4-203ENST00000416538 CAVIN1Q6NZI2 390 aaKnown RBP15.39■□□□□ 0.05
UBXN4-203ENST00000416538 CCNI2Q6ZMN8 369 aaPredicted RBP15.39■□□□□ 0.05
UBXN4-203ENST00000416538 KDM7AQ6ZMT4 941 aa15.39■□□□□ 0.05
UBXN4-203ENST00000416538 GCNT7Q6ZNI0 430 aa15.39■□□□□ 0.05
UBXN4-203ENST00000416538 ERN2Q76MJ5 926 aaKnown RBP15.39■□□□□ 0.05
UBXN4-203ENST00000416538 PRPF39Q86UA1 669 aaKnown RBP15.39■□□□□ 0.05
UBXN4-203ENST00000416538 CCDC114Q96M63 670 aa15.39■□□□□ 0.05
UBXN4-203ENST00000416538 CDC6Q99741 560 aa15.39■□□□□ 0.05
UBXN4-203ENST00000416538 BPIFA3Q9BQP9 254 aa15.39■□□□□ 0.05
UBXN4-203ENST00000416538 HDAC8Q9BY41 377 aa15.39■□□□□ 0.05
UBXN4-203ENST00000416538 TRIM7Q9C029 511 aa15.39■□□□□ 0.05
UBXN4-203ENST00000416538 TTYH3Q9C0H2 523 aa15.39■□□□□ 0.05
UBXN4-203ENST00000416538 TMEM51Q9NW97 253 aa15.39■□□□□ 0.05
UBXN4-203ENST00000416538 GPATCH2LQ9NWQ4 482 aa15.39■□□□□ 0.05
UBXN4-203ENST00000416538 GGT7Q9UJ14 662 aa15.39■□□□□ 0.05
UBXN4-203ENST00000416538 TPX2Q9ULW0 747 aaKnown RBP15.39■□□□□ 0.05
UBXN4-203ENST00000416538 DMTF1Q9Y222 760 aa15.39■□□□□ 0.05
UBXN4-203ENST00000416538 ADAMTS20P59510 1910 aa15.39■□□□□ 0.05
UBXN4-203ENST00000416538 TMEM8BA6NDV4 472 aa15.38■□□□□ 0.05
UBXN4-203ENST00000416538 SRRM3A6NNA2 597 aaPredicted RBP15.38■□□□□ 0.05
UBXN4-203ENST00000416538 TNFSF14O43557 240 aa15.38■□□□□ 0.05
UBXN4-203ENST00000416538 SDC3O75056 442 aa15.38■□□□□ 0.05
UBXN4-203ENST00000416538 FERP16591 822 aa15.38■□□□□ 0.05
UBXN4-203ENST00000416538 ITGB7P26010 798 aa15.38■□□□□ 0.05
UBXN4-203ENST00000416538 CLDN2P57739 230 aa15.38■□□□□ 0.05
UBXN4-203ENST00000416538 DNAJC3Q13217 504 aa15.38■□□□□ 0.05
UBXN4-203ENST00000416538 SUZ12Q15022 739 aaKnown RBP15.38■□□□□ 0.05
UBXN4-203ENST00000416538 IQCB1Q15051 598 aa15.38■□□□□ 0.05
UBXN4-203ENST00000416538 CCDC157Q569K6 752 aa15.38■□□□□ 0.05
UBXN4-203ENST00000416538 CARD16Q5EG05 197 aa15.38■□□□□ 0.05
UBXN4-203ENST00000416538 ATXN7L2Q5T6C5 722 aaPredicted RBP15.38■□□□□ 0.05
UBXN4-203ENST00000416538 ACAD10Q6JQN1 1059 aa15.38■□□□□ 0.05
UBXN4-203ENST00000416538 TMPRSS7Q7RTY8 843 aa15.38■□□□□ 0.05
UBXN4-203ENST00000416538 HORMAD1Q86X24 394 aa15.38■□□□□ 0.05
UBXN4-203ENST00000416538 SLC22A18ASQ8N1D0 253 aa15.38■□□□□ 0.05
UBXN4-203ENST00000416538 ARFGAP1Q8N6T3 406 aa15.38■□□□□ 0.05
UBXN4-203ENST00000416538 RTL3Q8N8U3 475 aaKnown RBP15.38■□□□□ 0.05
UBXN4-203ENST00000416538 NAP1L5Q96NT1 182 aaPredicted RBP15.38■□□□□ 0.05
UBXN4-203ENST00000416538 PEBP4Q96S96 227 aa15.38■□□□□ 0.05
UBXN4-203ENST00000416538 ZDHHC6Q9H6R6 413 aa15.38■□□□□ 0.05
UBXN4-203ENST00000416538 FTSJ1Q9UET6 329 aa15.38■□□□□ 0.05
UBXN4-203ENST00000416538 FZD10Q9ULW2 581 aa15.38■□□□□ 0.05
UBXN4-203ENST00000416538 ITM2BQ9Y287 266 aa15.38■□□□□ 0.05
UBXN4-203ENST00000416538 ASXL3Q9C0F0 2248 aa15.37■□□□□ 0.05
UBXN4-203ENST00000416538 FAM149AA5PLN7 773 aa15.37■□□□□ 0.05
UBXN4-203ENST00000416538 TMCO5BA8MYB1 307 aa15.37■□□□□ 0.05
UBXN4-203ENST00000416538 PRAMEF26H0Y7S4 382 aa15.37■□□□□ 0.05
UBXN4-203ENST00000416538 RAD51BO15315 384 aa15.37■□□□□ 0.05
UBXN4-203ENST00000416538 DFNA5O60443 496 aa15.37■□□□□ 0.05
UBXN4-203ENST00000416538 RAMP2O60895 175 aa15.37■□□□□ 0.05
UBXN4-203ENST00000416538 ADRB3P13945 408 aa15.37■□□□□ 0.05
UBXN4-203ENST00000416538 L1CAMP32004 1257 aa15.37■□□□□ 0.05
UBXN4-203ENST00000416538 RECQLP46063 649 aaPredicted RBP15.37■□□□□ 0.05
UBXN4-203ENST00000416538 RXRGP48443 463 aa15.37■□□□□ 0.05
UBXN4-203ENST00000416538 DNA2P51530 1060 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms