RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 SLC6A18Q96N87 628 aa11.14□□□□□ -0.63
A1CF-208ENST00000414883 KCTD15Q96SI1 283 aaPredicted RBP11.14□□□□□ -0.63
A1CF-208ENST00000414883 DNAJC7Q99615 494 aa11.14□□□□□ -0.63
A1CF-208ENST00000414883 THAP2Q9H0W7 228 aa11.14□□□□□ -0.63
A1CF-208ENST00000414883 KDM4CQ9H3R0 1056 aa11.14□□□□□ -0.63
A1CF-208ENST00000414883 TSPY26PQ9H489 355 aa11.14□□□□□ -0.63
A1CF-208ENST00000414883 PCSK1NQ9UHG2 260 aa11.14□□□□□ -0.63
A1CF-208ENST00000414883 AP4E1Q9UPM8 1137 aa11.14□□□□□ -0.63
A1CF-208ENST00000414883 ANKRD6Q9Y2G4 727 aa11.14□□□□□ -0.63
A1CF-208ENST00000414883 LUC7L2Q9Y383 392 aaKnown RBP11.14□□□□□ -0.63
A1CF-208ENST00000414883 SNX11Q9Y5W9 270 aa11.14□□□□□ -0.63
A1CF-208ENST00000414883 NBEAQ8NFP9 2946 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 ANKRD62A6NC57 917 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 LRRC72A6NJI9 287 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 RASA4BC9J798 803 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 SPINT1O43278 529 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 RASA4O43374 803 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 CREB3O43889 395 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 BNIP3LO60238 219 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 OPHN1O60890 802 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 CBFA2T3O75081 653 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 LEFTY1O75610 366 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 CEACAM1P13688 526 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 GKP32189 559 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 HTR7P34969 479 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 ETFBP38117 255 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 NOVA1P51513 510 aaKnown RBP11.13□□□□□ -0.63
A1CF-208ENST00000414883 CCNHP51946 323 aaPredicted RBP11.13□□□□□ -0.63
A1CF-208ENST00000414883 RACK1P63244 317 aaKnown RBP11.13□□□□□ -0.63
A1CF-208ENST00000414883 SFSWAPQ12872 951 aaKnown RBP11.13□□□□□ -0.63
A1CF-208ENST00000414883 SLC14A1Q13336 389 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 SERINC3Q13530 473 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 DPYSQ14117 519 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 HLA-BQ31612 363 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 TDRD12Q587J7 1177 aaKnown RBP11.13□□□□□ -0.63
A1CF-208ENST00000414883 ERMARDQ5T6L9 678 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 FAM46CQ5VWP2 391 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 TXNRD3NBQ6F5E7 133 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 TRIM69Q86WT6 500 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 VSTM4Q8IW00 320 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 ARHGAP12Q8IWW6 846 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 NIPA2Q8N8Q9 360 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 NETO2Q8NC67 525 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 TRIM11Q96F44 468 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 BTBD6Q96KE9 485 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 CAMK1GQ96NX5 476 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 EPAS1Q99814 870 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 HDAC8Q9BY41 377 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 PDFQ9HBH1 243 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 MYO1AQ9UBC5 1043 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 IL36AQ9UHA7 158 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 SCINQ9Y6U3 715 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 SHROOM3Q8TF72 1996 aa11.13□□□□□ -0.63
A1CF-208ENST00000414883 ANKRD11Q6UB99 2663 aaPredicted RBP11.12□□□□□ -0.63
A1CF-208ENST00000414883 GOLGA4Q13439 2230 aaKnown RBP11.12□□□□□ -0.63
A1CF-208ENST00000414883 TDRD6O60522 2096 aaKnown RBP11.12□□□□□ -0.63
A1CF-208ENST00000414883 C1QTNF3-AMACRE9PGA6 284 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 VILLO15195 856 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 FGF10O15520 208 aaPredicted RBP11.12□□□□□ -0.63
A1CF-208ENST00000414883 SH3BP5O60239 455 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 PRNPP04156 253 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 ZNF883P0CG24 379 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 PCK1P35558 622 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 EIF4A3P38919 411 aaKnown RBP11.12□□□□□ -0.63
A1CF-208ENST00000414883 YBEYP58557 167 aaPredicted RBP11.12□□□□□ -0.63
A1CF-208ENST00000414883 SLC25A11Q02978 314 aaKnown RBP11.12□□□□□ -0.63
A1CF-208ENST00000414883 SHBQ15464 509 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 ZNF423Q2M1K9 1284 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 CARD16Q5EG05 197 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 SPECC1LQ69YQ0 1117 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 ALKBH5Q6P6C2 394 aaKnown RBP11.12□□□□□ -0.63
A1CF-208ENST00000414883 RFX8Q6ZV50 586 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 CPNE8Q86YQ8 564 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 PSTKQ8IV42 348 aaKnown RBP11.12□□□□□ -0.63
A1CF-208ENST00000414883 TP53INP2Q8IXH6 220 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 NPWQ8N729 165 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 RNF214Q8ND24 703 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 OR6K2Q8NGY2 324 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 GRIN3AQ8TCU5 1115 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.12□□□□□ -0.63
A1CF-208ENST00000414883 TM6SF2Q9BZW4 377 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 DHX35Q9H5Z1 703 aaKnown RBP11.12□□□□□ -0.63
A1CF-208ENST00000414883 GAREM1Q9H706 876 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 CWC15Q9P013 229 aaKnown RBP11.12□□□□□ -0.63
A1CF-208ENST00000414883 LHX3Q9UBR4 397 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 ZFR2Q9UPR6 939 aaKnown RBP11.12□□□□□ -0.63
A1CF-208ENST00000414883 MFHAS1Q9Y4C4 1052 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 CHD6Q8TD26 2715 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 PTPRBP23467 1997 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 CACNA1BQ00975 2339 aa11.12□□□□□ -0.63
A1CF-208ENST00000414883 TBC1D3DA0A087WVF3 549 aa11.11□□□□□ -0.63
A1CF-208ENST00000414883 TBC1D3IA0A087WXS9 549 aa11.11□□□□□ -0.63
A1CF-208ENST00000414883 TBC1D3EA0A087X179 549 aa11.11□□□□□ -0.63
A1CF-208ENST00000414883 TBC1D3KA0A087X1G2 549 aa11.11□□□□□ -0.63
A1CF-208ENST00000414883 TBC1D3FA6NER0 549 aaPredicted RBP11.11□□□□□ -0.63
A1CF-208ENST00000414883 EIF3CLB5ME19 914 aaKnown RBP11.11□□□□□ -0.63
A1CF-208ENST00000414883 TBC1D3LB9A6J9 549 aa11.11□□□□□ -0.63
A1CF-208ENST00000414883 H0Y8X5 98 aa11.11□□□□□ -0.63
A1CF-208ENST00000414883 J3KR12 359 aa11.11□□□□□ -0.63
A1CF-208ENST00000414883 KPNA3O00505 521 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms