RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 COLEC11Q9BWP8 271 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 SLC12A9Q9BXP2 914 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 ITPAQ9BY32 194 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 NUF2Q9BZD4 464 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 GPR61Q9BZJ8 451 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 FAM107BQ9H098 131 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 OPA3Q9H6K4 179 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 GP6Q9HCN6 339 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 IL1RAPL2Q9NP60 686 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 TNFRSF12AQ9NP84 129 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 DDX28Q9NUL7 540 aaKnown RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 FAM86C1Q9NVL1 165 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 TRNAU1APQ9NX07 287 aaKnown RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 SOHLH2Q9NX45 425 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 TMOD3Q9NYL9 352 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 PRR13Q9NZ81 148 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 TMOD2Q9NZR1 351 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 SELENONQ9NZV5 590 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 KLHL14Q9P2G3 628 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 COPG2Q9UBF2 871 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 BAIAP2L1Q9UHR4 511 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 CYTH4Q9UIA0 394 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 FBXL21Q9UKT6 434 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 TMPRSS11EQ9UL52 423 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 CORO2BQ9UQ03 480 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 AKT3Q9Y243 479 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 RPH3AQ9Y2J0 694 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.72□□□□□ -1.817e-10■□□□□ 9.8
SF3B1-203ENST00000414174 CACNG2Q9Y698 323 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 FAM169AQ9Y6X4 670 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 FRMPD4Q14CM0 1322 aa3.71□□□□□ -1.81
SF3B1-203ENST00000414174 A0A087WUV0 522 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 A0A1W2PQU0 124 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 A0A1W2PRV1 198 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 ERICH2A1L162 156 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 DENND3A2RUS2 1198 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 C5orf51A6NDU8 294 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 MFSD2BA6NFX1 497 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 SLC15A5A6NIM6 579 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 TMEM210A6NLX4 147 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 ZNF891A8MT65 544 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 LGALS16A8MUM7 142 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 ERVV-2B6SEH9 535 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 FAM86B1E9PN63 330 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 POLRMTO00411 1230 aaKnown RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 DNALI1O14645 258 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 LIN7AO14910 233 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 ZNF263O14978 683 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 ADAM20O43506 726 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 HCRTR2O43614 444 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 GATCO43716 136 aaKnown RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 MED24O75448 989 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 CRCPO75575 148 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 SURF6O75683 361 aaKnown RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 UBXN7O94888 489 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 IL1AP01583 271 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 ALPPP05187 535 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 EIF2S1P05198 315 aaKnown RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 SNRPAP09012 282 aaKnown RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 ZCCHC18P0CG32 403 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 ERVK-10P10266 1014 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 ALPPL2P10696 532 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 EZRP15311 586 aaKnown RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 PNLIPP16233 465 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 PRKCAP17252 672 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 GJA1P17302 382 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 CKMT2P17540 419 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 TGM1P22735 817 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 GPTP24298 496 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 PSMA2P25787 234 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 TNFRSF8P28908 595 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 HOXC8P31273 242 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 GRK5P34947 590 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 MDH1P40925 334 aaKnown RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 EIF2DP41214 584 aaKnown RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 LSSP48449 732 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 MECP2P51608 486 aaKnown RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 AGFG1P52594 562 aaKnown RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 METAP1P53582 386 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 CASP9P55211 416 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 CORO7P57737 925 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 RTP1P59025 263 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 IL2P60568 153 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 PMP22Q01453 160 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 DSG1Q02413 1049 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 CREMQ03060 361 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 UBE3AQ05086 875 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 CHRNDQ07001 517 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 GPS1Q13098 491 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 MAMLD1Q13495 774 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 CAPSQ13938 189 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 SLC39A14Q15043 492 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 PDK1Q15118 436 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 CNN3Q15417 329 aaKnown RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 SEC23AQ15436 765 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 TARBP2Q15633 366 aaKnown RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 DGKDQ16760 1214 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 PARP6Q2NL67 630 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 KLHL38Q2WGJ6 581 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 HFEQ30201 348 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms