RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 GM2AP17900 193 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 TAC1P20366 129 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 TARSP26639 723 aaKnown RBP9.56□□□□□ -0.88
SNHG3-201ENST00000413987 ADSLP30566 484 aaPredicted RBP9.56□□□□□ -0.88
SNHG3-201ENST00000413987 ALDH9A1P49189 494 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 CYP2J2P51589 502 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 HADHBP55084 474 aaKnown RBP9.56□□□□□ -0.88
SNHG3-201ENST00000413987 SLC34A1Q06495 639 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 CAPSQ13938 189 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 FSCN1Q16658 493 aaKnown RBP9.56□□□□□ -0.88
SNHG3-201ENST00000413987 C2orf76Q3KRA6 126 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 FLYWCH1Q4VC44 716 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 USP39Q53GS9 565 aaKnown RBP9.56□□□□□ -0.88
SNHG3-201ENST00000413987 DCAF12L1Q5VU92 463 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 SNX30Q5VWJ9 437 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 MFSD14CQ5VZR4 134 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 DPY19L2P1Q6NXN4 242 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 TAF2Q6P1X5 1199 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 CXCL17Q6UXB2 119 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 ZYG11AQ6WRX3 759 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 THAP5Q7Z6K1 395 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 RHPN2Q8IUC4 686 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 LIX1LQ8IVB5 337 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 THNSL1Q8IYQ7 743 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 STKLD1Q8NE28 680 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 GATA6Q92908 595 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 SLC7A6OSQ96CW6 309 aaPredicted RBP9.56□□□□□ -0.88
SNHG3-201ENST00000413987 TMEM169Q96HH4 297 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 FAM84AQ96KN4 292 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 NLRP4Q96MN2 994 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 CBWD1Q9BRT8 395 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 DENND2DQ9H6A0 471 aaPredicted RBP9.56□□□□□ -0.88
SNHG3-201ENST00000413987 ERVK-5Q9HDB9 667 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 SNTG1Q9NSN8 517 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 LGALS13Q9UHV8 139 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 GMEB1Q9Y692 573 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 COMMD3-BMI1R4GMX3 469 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 THSD7BQ9C0I4 1608 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 ANKRD63C9JTQ0 380 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 PRODHO43272 600 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 SPOPO43791 374 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 BEST1O76090 585 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 ZWINTO95229 277 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 C22orf31O95567 290 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 IFNB1P01574 187 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 C6P13671 934 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 ZNF3P17036 446 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 JAK1P23458 1154 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 CTSSP25774 331 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 PON1P27169 355 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 JAM2P57087 298 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 CAV1Q03135 178 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 PMS2P11Q13670 270 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 PTK2BQ14289 1009 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 CNN3Q15417 329 aaKnown RBP9.55□□□□□ -0.88
SNHG3-201ENST00000413987 CYP1B1Q16678 543 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 PABPC1LQ4VXU2 614 aaKnown RBP9.55□□□□□ -0.88
SNHG3-201ENST00000413987 GNASQ5JWF2 1037 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 MARCH8Q5T0T0 291 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 MAP3K21Q5TCX8 1036 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 SEL1L2Q5TEA6 688 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 RASIP1Q5U651 963 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 EFCAB12Q6NXP0 572 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 CCDC137Q6PK04 289 aaKnown RBP9.55□□□□□ -0.88
SNHG3-201ENST00000413987 ZNF365Q70YC5 407 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 MOGAT3Q86VF5 341 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 CDR2LQ86X02 465 aaPredicted RBP9.55□□□□□ -0.88
SNHG3-201ENST00000413987 RHOT2Q8IXI1 618 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 SYCP3Q8IZU3 236 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 RIBC1Q8N443 379 aaPredicted RBP9.55□□□□□ -0.88
SNHG3-201ENST00000413987 ATP11CQ8NB49 1132 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 MCPH1Q8NEM0 835 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 AZIN2Q96A70 460 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 C18orf8Q96DM3 657 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 ZNF764Q96H86 408 aaPredicted RBP9.55□□□□□ -0.88
SNHG3-201ENST00000413987 FAM167AQ96KS9 214 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 SAMD11Q96NU1 681 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 OLFM3Q96PB7 478 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 KCNC2Q96PR1 638 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 GAL3ST1Q99999 423 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 ORAI3Q9BRQ5 295 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 CENPKQ9BS16 269 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 STRA6Q9BX79 667 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 SENP6Q9GZR1 1112 aaPredicted RBP9.55□□□□□ -0.88
SNHG3-201ENST00000413987 MMADHCQ9H3L0 296 aaPredicted RBP9.55□□□□□ -0.88
SNHG3-201ENST00000413987 HSPBP1Q9NZL4 362 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 WHRNQ9P202 907 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 ZNF212Q9UDV6 495 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 GINS2Q9Y248 185 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 CHKBQ9Y259 395 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 PCDHA3Q9Y5H8 950 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 SNX13Q9Y5W8 968 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 TCRBV16S1A1N1A0A5B0 115 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 LCHNA4D1U4 455 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 GOLGA8IPA6NC78 632 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 GOLGA8JA6NMD2 632 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 STMND1H3BQB6 276 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 ZSCAN9O15535 394 aaPredicted RBP9.55□□□□□ -0.88
SNHG3-201ENST00000413987 FKTNO75072 461 aa9.55□□□□□ -0.88
SNHG3-201ENST00000413987 AKAP3O75969 853 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms