RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 DYRK4Q9NR20 520 aa9.77□□□□□ -0.85
RFFL-203ENST00000413582 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.77□□□□□ -0.85
RFFL-203ENST00000413582 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.77□□□□□ -0.85
RFFL-203ENST00000413582 KIAA1468Q9P260 1216 aa9.77□□□□□ -0.85
RFFL-203ENST00000413582 VPS51Q9UID3 782 aa9.77□□□□□ -0.85
RFFL-203ENST00000413582 ACSL6Q9UKU0 697 aa9.77□□□□□ -0.85
RFFL-203ENST00000413582 PCDHGA7Q9Y5G6 932 aa9.77□□□□□ -0.85
RFFL-203ENST00000413582 HS3ST3A1Q9Y663 406 aa9.77□□□□□ -0.85
RFFL-203ENST00000413582 DOCK4Q8N1I0 1966 aa9.77□□□□□ -0.85
RFFL-203ENST00000413582 E5RJQ4 531 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 NTN3O00634 580 aaPredicted RBP9.76□□□□□ -0.85
RFFL-203ENST00000413582 PLD2O14939 933 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 SUV39H1O43463 412 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 NOBOXO60393 691 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 SMC2O95347 1197 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 ITGB2P05107 769 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 FAM87AP0C7U9 286 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 SLC2A3P11169 496 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 RRM1P23921 792 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 CCR1P32246 355 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 ACADSBP45954 432 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 RABIFP47224 123 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 FMO5P49326 533 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 NEK3P51956 506 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 RPS21P63220 83 aaKnown RBP9.76□□□□□ -0.85
RFFL-203ENST00000413582 EIF2B5Q13144 721 aaKnown RBP9.76□□□□□ -0.85
RFFL-203ENST00000413582 AUHQ13825 339 aaKnown RBP9.76□□□□□ -0.85
RFFL-203ENST00000413582 SPIDRQ14159 915 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 KIAA1161Q6NSJ0 714 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 DENND1BQ6P3S1 775 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 C22orf39Q6P5X5 142 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 ZNF574Q6ZN55 896 aaPredicted RBP9.76□□□□□ -0.85
RFFL-203ENST00000413582 B3GNT8Q7Z7M8 397 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 RBFAQ8N0V3 343 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 WDR48Q8TAF3 677 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 LMX1AQ8TE12 382 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 NAT6Q93015 286 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 SGF29Q96ES7 293 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 GSDMAQ96QA5 445 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 KLF6Q99612 283 aaPredicted RBP9.76□□□□□ -0.85
RFFL-203ENST00000413582 IL12RB2Q99665 862 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 CCDC3Q9BQI4 270 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 SLC17A9Q9BYT1 436 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 DDIT4Q9NX09 232 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 SLC12A6Q9UHW9 1150 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 VANGL2Q9ULK5 521 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 TBC1D30Q9Y2I9 924 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 FARP1Q9Y4F1 1045 aaPredicted RBP9.76□□□□□ -0.85
RFFL-203ENST00000413582 USP9XQ93008 2570 aaPredicted RBP9.76□□□□□ -0.85
RFFL-203ENST00000413582 LRP4O75096 1905 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 MYO9AB2RTY4 2548 aa9.76□□□□□ -0.85
RFFL-203ENST00000413582 RELNP78509 3460 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 SYNJ2BP-COX16A0A087WUM0 186 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 PMM2O15305 246 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 SMAD6O43541 496 aaKnown RBP9.75□□□□□ -0.85
RFFL-203ENST00000413582 CLDN11O75508 207 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 GCATO75600 419 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 LEFTY1O75610 366 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 GJB6O95452 261 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 PAK4O96013 591 aaPredicted RBP9.75□□□□□ -0.85
RFFL-203ENST00000413582 ADRB3P13945 408 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 ITGB7P26010 798 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 SLC5A2P31639 672 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 UGT1A5P35504 534 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 RPIAP49247 311 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 CLCN6P51797 869 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 PMS1P54277 932 aaKnown RBP9.75□□□□□ -0.85
RFFL-203ENST00000413582 YWHAZP63104 245 aaKnown RBP9.75□□□□□ -0.85
RFFL-203ENST00000413582 PDE1CQ14123 709 aaPredicted RBP9.75□□□□□ -0.85
RFFL-203ENST00000413582 TAF5Q15542 800 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 TGIF1Q15583 401 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 MEA1Q16626 185 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 C5orf22Q49AR2 442 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 ARSIQ5FYB1 569 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 SASS6Q6UVJ0 657 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 DPY19L3Q6ZPD9 716 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 USP53Q70EK8 1073 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 C14orf80Q86SX3 495 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 TMEM110Q86TL2 294 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 ARHGEF19Q8IW93 802 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 DCAF4L2Q8NA75 395 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 ATP11CQ8NB49 1132 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 LMO3Q8TAP4 145 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 STK32AQ8WU08 396 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 PPP1R16AQ96I34 528 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 SLC2A13Q96QE2 648 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 SEMA3CQ99985 751 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 LRRC61Q9BV99 259 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 C2orf49Q9BVC5 232 aaPredicted RBP9.75□□□□□ -0.85
RFFL-203ENST00000413582 MUC3BQ9H195 1237 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 TNKS2Q9H2K2 1166 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 TCEAL2Q9H3H9 227 aaPredicted RBP9.75□□□□□ -0.85
RFFL-203ENST00000413582 THAP9Q9H5L6 903 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 SYNDIG1Q9H7V2 258 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 COX16Q9P0S2 106 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 ANKMY1Q9P2S6 941 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 SPASTQ9UBP0 616 aa9.75□□□□□ -0.85
RFFL-203ENST00000413582 APOBEC3BQ9UH17 382 aaKnown RBP9.75□□□□□ -0.85
RFFL-203ENST00000413582 ARMCX3Q9UH62 379 aaPredicted RBP9.75□□□□□ -0.85
RFFL-203ENST00000413582 IL36AQ9UHA7 158 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms