RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 RXRGP48443 463 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 TEAD4Q15561 434 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 GALNT7Q86SF2 657 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 ARMC8Q8IUR7 673 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 MARK4Q96L34 752 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 NECTIN3Q9NQS3 549 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 DLGAP2Q9P1A6 1054 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 NDUFAF1Q9Y375 327 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 PXDNLA1KZ92 1463 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 FAM92AA1XBS5 289 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 SLC28A2O43868 658 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 NQO1P15559 274 aaKnown RBP11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 KCNA5P22460 613 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 MAPK10P53779 464 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 SMCO1Q147U7 214 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 PAGE2Q7Z2X7 111 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 ULK2Q8IYT8 1036 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 OR5T3Q8NGG3 340 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 CAPSLQ8WWF8 208 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 RUBCNQ92622 972 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 TMPRSS4Q9NRS4 437 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 SDK1Q7Z5N4 2213 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 RRM1P23921 792 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 ABL2P42684 1182 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 TBX2Q13207 712 aaPredicted RBP11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 OTOP2Q7RTS6 562 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 SLC41A1Q8IVJ1 513 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 FAM126BQ8IXS8 530 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 SELENOMQ8WWX9 145 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 OR8D1Q8WZ84 308 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 GAL3ST3Q96A11 431 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 ZDHHC15Q96MV8 337 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 QRFPRQ96P65 431 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 PSMD13Q9UNM6 376 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 SLC12A4Q9UP95 1085 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 ACOT9Q9Y305 439 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 MORC2Q9Y6X9 1032 aaPredicted RBP11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 RIMBP3CA6NJZ7 1639 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 RIMBP3BA6NNM3 1639 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 RIMBP3Q9UFD9 1639 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 FFAR3O14843 346 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 UBDO15205 165 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 GPR42O15529 346 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 SCNN1AP37088 669 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 GRTP1Q5TC63 336 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 PPP2R2DQ66LE6 453 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 P4HA3Q7Z4N8 544 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 ARNTL2Q8WYA1 636 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 GAD1Q99259 594 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 H7C0S8 307 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 APODP05090 189 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 ZCCHC18P0CG32 403 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 IKBIPQ70UQ0 350 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 ADGRA1Q86SQ6 560 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 TXNRD3Q86VQ6 643 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 LPPQ93052 612 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 FAIM2Q9BWQ8 316 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 RNF121Q9H920 327 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 RIC1Q4ADV7 1423 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 NT5C1B-RDH14C9J2C7 533 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 FOXN3O00409 490 aaPredicted RBP11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 GYPCP04921 128 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 SLC35G4P0C7Q5 338 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 RASA2Q15283 850 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 TSGA10IPQ3SY00 556 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 PGBD2Q6P3X8 592 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 DNERQ8NFT8 737 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 C2orf49Q9BVC5 232 aaPredicted RBP11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 ZNF222Q9UK12 451 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 STARD13Q9Y3M8 1113 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 PTPRJQ12913 1337 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 CEP170BQ9Y4F5 1589 aaPredicted RBP11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 PPP1R3GB7ZBB8 358 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 ERVK-21P61565 698 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 PGM5Q15124 567 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 RASGRP3Q8IV61 690 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 OR4A15Q8NGL6 344 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 MAML3Q96JK9 1138 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 POLR1EQ9GZS1 481 aaKnown RBP11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 SLC28A3Q9HAS3 691 aa11.35□□□□□ -0.59
PRPF40A-202ENST00000410080 S100A3P33764 101 aa11.34□□□□□ -0.59
PRPF40A-202ENST00000410080 NDUFA5Q16718 116 aa11.34□□□□□ -0.59
PRPF40A-202ENST00000410080 LNX2Q8N448 690 aa11.34□□□□□ -0.59
PRPF40A-202ENST00000410080 OR14C36Q8NHC7 312 aa11.34□□□□□ -0.59
PRPF40A-202ENST00000410080 DLC1Q96QB1 1528 aa11.34□□□□□ -0.59
PRPF40A-202ENST00000410080 RHPN2P1A8MT19 583 aa11.34□□□□□ -0.59
PRPF40A-202ENST00000410080 RNASEH2AO75792 299 aaKnown RBP11.34□□□□□ -0.59
PRPF40A-202ENST00000410080 LRATO95237 230 aa11.34□□□□□ -0.59
PRPF40A-202ENST00000410080 CHRNGP07510 517 aa11.34□□□□□ -0.59
PRPF40A-202ENST00000410080 FASP25445 335 aa11.34□□□□□ -0.59
PRPF40A-202ENST00000410080 UGT1A5P35504 534 aa11.34□□□□□ -0.59
PRPF40A-202ENST00000410080 NR2C2P49116 596 aa11.34□□□□□ -0.59
PRPF40A-202ENST00000410080 STARP49675 285 aa11.34□□□□□ -0.59
PRPF40A-202ENST00000410080 ELOAQ14241 798 aaKnown RBP11.34□□□□□ -0.59
PRPF40A-202ENST00000410080 CBX2Q14781 532 aaPredicted RBP11.34□□□□□ -0.59
PRPF40A-202ENST00000410080 FAM46CQ5VWP2 391 aa11.34□□□□□ -0.59
PRPF40A-202ENST00000410080 METTL7BQ6UX53 244 aa11.34□□□□□ -0.59
PRPF40A-202ENST00000410080 FRMD8Q9BZ67 464 aaPredicted RBP11.34□□□□□ -0.59
PRPF40A-202ENST00000410080 ABHD16BQ9H3Z7 469 aa11.34□□□□□ -0.59
PRPF40A-202ENST00000410080 UBAP1Q9NZ09 502 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms