RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 CEP192Q8TEP8 1941 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 C1QTNF3-AMACRE9PGA6 284 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 PLK4O00444 970 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 NRDCO43847 1150 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 RNASEH2AO75792 299 aaKnown RBP24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 GKP32189 559 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 PTGER3P43115 390 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 DHPSP49366 369 aaPredicted RBP24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 RHOAP61586 193 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 GSE1Q14687 1217 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 IFI16Q16666 785 aaKnown RBP24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 FAM46CQ5VWP2 391 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 USP30Q70CQ3 517 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 ALYREFQ86V81 257 aaKnown RBP24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 ATPAF2Q8N5M1 289 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 OR2AP1Q8NGE2 309 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 MAK16Q9BXY0 300 aaKnown RBP24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 NEUROG2Q9H2A3 272 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 ZDHHC6Q9H6R6 413 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 GMEB2Q9UKD1 530 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 WASF2Q9Y6W5 498 aa24.25■■□□□ 1.47
UBE2E3-202ENST00000410062 ZNF487B1APH4 448 aa24.24■■□□□ 1.47
UBE2E3-202ENST00000410062 MAFKO60675 156 aa24.24■■□□□ 1.47
UBE2E3-202ENST00000410062 LEFTY1O75610 366 aa24.24■■□□□ 1.47
UBE2E3-202ENST00000410062 PALMO75781 387 aa24.24■■□□□ 1.47
UBE2E3-202ENST00000410062 GSRP00390 522 aa24.24■■□□□ 1.47
UBE2E3-202ENST00000410062 DRD3P35462 400 aa24.24■■□□□ 1.47
UBE2E3-202ENST00000410062 SNRPD1P62314 119 aaKnown RBP24.24■■□□□ 1.47
UBE2E3-202ENST00000410062 GBE1Q04446 702 aa24.24■■□□□ 1.47
UBE2E3-202ENST00000410062 LLGL1Q15334 1064 aa24.24■■□□□ 1.47
UBE2E3-202ENST00000410062 VSIG1Q86XK7 387 aa24.24■■□□□ 1.47
UBE2E3-202ENST00000410062 KATNAL2Q8IYT4 538 aa24.24■■□□□ 1.47
UBE2E3-202ENST00000410062 DCLK2Q8N568 766 aa24.24■■□□□ 1.47
UBE2E3-202ENST00000410062 TMIEQ8NEW7 156 aa24.24■■□□□ 1.47
UBE2E3-202ENST00000410062 EXOC2Q96KP1 924 aa24.24■■□□□ 1.47
UBE2E3-202ENST00000410062 HINFPQ9BQA5 517 aa24.24■■□□□ 1.47
UBE2E3-202ENST00000410062 HEPHQ9BQS7 1158 aa24.24■■□□□ 1.47
UBE2E3-202ENST00000410062 BTBD1Q9H0C5 482 aa24.24■■□□□ 1.47
UBE2E3-202ENST00000410062 LHX3Q9UBR4 397 aa24.24■■□□□ 1.47
UBE2E3-202ENST00000410062 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.24■■□□□ 1.47
UBE2E3-202ENST00000410062 RIF1Q5UIP0 2472 aaKnown RBP24.23■■□□□ 1.47
UBE2E3-202ENST00000410062 KPNA3O00505 521 aaPredicted RBP24.23■■□□□ 1.47
UBE2E3-202ENST00000410062 PRNPP04156 253 aa24.23■■□□□ 1.47
UBE2E3-202ENST00000410062 CTNNA1P35221 906 aaKnown RBP24.23■■□□□ 1.47
UBE2E3-202ENST00000410062 RFX6Q8HWS3 928 aa24.23■■□□□ 1.47
UBE2E3-202ENST00000410062 PLPP6Q8IY26 295 aa24.23■■□□□ 1.47
UBE2E3-202ENST00000410062 PLD5Q8N7P1 536 aa24.23■■□□□ 1.47
UBE2E3-202ENST00000410062 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.23■■□□□ 1.47
UBE2E3-202ENST00000410062 RUBCNQ92622 972 aa24.23■■□□□ 1.47
UBE2E3-202ENST00000410062 GDAP1L1Q96MZ0 367 aa24.23■■□□□ 1.47
UBE2E3-202ENST00000410062 TSGA10Q9BZW7 698 aa24.23■■□□□ 1.47
UBE2E3-202ENST00000410062 GUCA1BQ9UMX6 200 aa24.23■■□□□ 1.47
UBE2E3-202ENST00000410062 CAPN6Q9Y6Q1 641 aa24.23■■□□□ 1.47
UBE2E3-202ENST00000410062 SHROOM3Q8TF72 1996 aa24.23■■□□□ 1.47
UBE2E3-202ENST00000410062 EP300Q09472 2414 aaPredicted RBP24.23■■□□□ 1.47
UBE2E3-202ENST00000410062 KRIT1O00522 736 aa24.22■■□□□ 1.47
UBE2E3-202ENST00000410062 RETP07949 1114 aa24.22■■□□□ 1.47
UBE2E3-202ENST00000410062 CCDC175P0C221 793 aa24.22■■□□□ 1.47
UBE2E3-202ENST00000410062 CDKN2BP42772 138 aa24.22■■□□□ 1.47
UBE2E3-202ENST00000410062 CREB5Q02930 508 aa24.22■■□□□ 1.47
UBE2E3-202ENST00000410062 GALNT2Q10471 571 aa24.22■■□□□ 1.47
UBE2E3-202ENST00000410062 SFSWAPQ12872 951 aaKnown RBP24.22■■□□□ 1.47
UBE2E3-202ENST00000410062 SLC10A2Q12908 348 aaPredicted RBP24.22■■□□□ 1.47
UBE2E3-202ENST00000410062 MYLK3Q32MK0 819 aa24.22■■□□□ 1.47
UBE2E3-202ENST00000410062 SLC9A4Q6AI14 798 aa24.22■■□□□ 1.47
UBE2E3-202ENST00000410062 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.22■■□□□ 1.47
UBE2E3-202ENST00000410062 SPOCD1Q6ZMY3 1216 aa24.22■■□□□ 1.47
UBE2E3-202ENST00000410062 SLC41A1Q8IVJ1 513 aa24.22■■□□□ 1.47
UBE2E3-202ENST00000410062 LOXL4Q96JB6 756 aa24.22■■□□□ 1.47
UBE2E3-202ENST00000410062 ARRDC1-AS1Q9H2J1 176 aa24.22■■□□□ 1.47
UBE2E3-202ENST00000410062 EVLQ9UI08 416 aaPredicted RBP24.22■■□□□ 1.47
UBE2E3-202ENST00000410062 PCDHA3Q9Y5H8 950 aa24.22■■□□□ 1.47
UBE2E3-202ENST00000410062 GON4LQ3T8J9 2241 aa24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 APOL1O14791 398 aa24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 KRT86O43790 486 aa24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 EPN2O95208 641 aa24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 ZRANB2O95218 330 aaKnown RBP eCLIP24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 IGSF6O95976 241 aa24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 PEX11BO96011 259 aa24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 KRT10P13645 584 aa24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 GARSP41250 739 aaKnown RBP24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 DYNLT1P63172 113 aa24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 ZNF33AQ06730 810 aa24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 SLC10A7Q0GE19 358 aa24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 CNTN1Q12860 1018 aa24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 SPDYCQ5MJ68 293 aa24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 NT5DC3Q86UY8 548 aa24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 RCOR2Q8IZ40 523 aa24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 TSEN2Q8NCE0 465 aaKnown RBP24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 LRRN4Q8WUT4 740 aa24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 ARRDC3Q96B67 414 aa24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 HSPA12BQ96MM6 686 aa24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 CINPQ9BW66 212 aaPredicted RBP24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 SGK2Q9HBY8 427 aa24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 DTLQ9NZJ0 730 aa24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 FZD4Q9ULV1 537 aa24.21■■□□□ 1.47
UBE2E3-202ENST00000410062 SEMA4FO95754 770 aa24.2■■□□□ 1.47
UBE2E3-202ENST00000410062 RFTN1Q14699 578 aaPredicted RBP24.2■■□□□ 1.47
UBE2E3-202ENST00000410062 LBRQ14739 615 aaKnown RBP24.2■■□□□ 1.47
UBE2E3-202ENST00000410062 CCDC6Q16204 474 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms