RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 FAM90A14PP0C7W9 464 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 HOXD9P28356 352 aaPredicted RBP4.81□□□□□ -1.64
CLK1-203ENST00000409769 SLC8A1P32418 973 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 IDUAP35475 653 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 ME1P48163 572 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 THBS3P49746 956 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 AGTR2P50052 363 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 ZNF91Q05481 1191 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 DDR1Q08345 913 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 DMWDQ09019 674 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 KPNB1Q14974 876 aaKnown RBP4.81□□□□□ -1.64
CLK1-203ENST00000409769 ELF2Q15723 593 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 AAK1Q2M2I8 961 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 P3H1Q32P28 736 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 PRR5LQ6MZQ0 368 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 RINT1Q6NUQ1 792 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 RFX6Q8HWS3 928 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 ARFGAP1Q8N6T3 406 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 ENAHQ8N8S7 591 aaPredicted RBP4.81□□□□□ -1.64
CLK1-203ENST00000409769 RPS6KC1Q96S38 1066 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 TRMOQ9BU70 441 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 ELOVL1Q9BW60 279 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 NYXQ9GZU5 481 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 EPS8L2Q9H6S3 715 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 TRMT112Q9UI30 125 aaKnown RBP4.81□□□□□ -1.64
CLK1-203ENST00000409769 LRP12Q9Y561 859 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 HS3ST3B1Q9Y662 390 aa4.81□□□□□ -1.64
CLK1-203ENST00000409769 LRRC37AA6NMS7 1700 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 ARAP2Q8WZ64 1704 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 BRCA1P38398 1863 aaKnown RBP4.8□□□□□ -1.64
CLK1-203ENST00000409769 CACNA1SQ13698 1873 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 C3orf70A6NLC5 250 aaPredicted RBP4.8□□□□□ -1.64
CLK1-203ENST00000409769 PRR23D1E9PI22 279 aaPredicted RBP4.8□□□□□ -1.64
CLK1-203ENST00000409769 TULP3O75386 442 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 RPP40O75818 363 aaKnown RBP4.8□□□□□ -1.64
CLK1-203ENST00000409769 SERPINB2P05120 415 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 ENO1P06733 434 aaKnown RBP4.8□□□□□ -1.64
CLK1-203ENST00000409769 PRR23D2P0DMB1 279 aaPredicted RBP4.8□□□□□ -1.64
CLK1-203ENST00000409769 KLRK1P26718 216 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 NUCB1Q02818 461 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 BIRC2Q13490 618 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 BLMHQ13867 455 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 SEMA3AQ14563 771 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 LEXMQ3ZCV2 418 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 EARS2Q5JPH6 523 aaKnown RBP4.8□□□□□ -1.64
CLK1-203ENST00000409769 WDR93Q6P2C0 686 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 RBM44Q6ZP01 1051 aaKnown RBP4.8□□□□□ -1.64
CLK1-203ENST00000409769 MEPCEQ7L2J0 689 aaKnown RBP4.8□□□□□ -1.64
CLK1-203ENST00000409769 TFAP2DQ7Z6R9 452 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 PIP4P1Q86T03 277 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 NBPF5PQ86XG9 351 aaPredicted RBP4.8□□□□□ -1.64
CLK1-203ENST00000409769 CACNA2D3Q8IZS8 1091 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 STT3BQ8TCJ2 826 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 POF1BQ8WVV4 589 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 IGFBPL1Q8WX77 278 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 CELF1Q92879 486 aaKnown RBP4.8□□□□□ -1.64
CLK1-203ENST00000409769 TRMT61AQ96FX7 289 aaKnown RBP4.8□□□□□ -1.64
CLK1-203ENST00000409769 ZFYVE19Q96K21 471 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 FCRL5Q96RD9 977 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 NPAS1Q99742 590 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 RTKNQ9BST9 563 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 TM2D2Q9BX73 214 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 ARL8BQ9NVJ2 186 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 ASNSD1Q9NWL6 643 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 VPS4AQ9UN37 437 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 CNTN6Q9UQ52 1028 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 PA2G4Q9UQ80 394 aaKnown RBP4.8□□□□□ -1.64
CLK1-203ENST00000409769 EXOC6BQ9Y2D4 811 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 HEMK1Q9Y5R4 338 aaPredicted RBP4.8□□□□□ -1.64
CLK1-203ENST00000409769 LTBP1Q14766 1721 aa4.8□□□□□ -1.64
CLK1-203ENST00000409769 CYP3A7-CYP3A51PA0A087WV96 503 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 EFCAB8A8MWE9 144 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 F5H423 210 aaPredicted RBP4.79□□□□□ -1.64
CLK1-203ENST00000409769 EYA2O00167 538 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 ACKR2O00590 384 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 INPPL1O15357 1258 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 SURF6O75683 361 aaKnown RBP4.79□□□□□ -1.64
CLK1-203ENST00000409769 CIAO1O76071 339 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 TOMM40O96008 361 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 PLAUP00749 431 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 CD63P08962 238 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 CTSAP10619 480 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 RPS6KB1P23443 525 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 CYP3A7P24462 503 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 STAT6P42226 847 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 SOX2P48431 317 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 FOXL2P58012 376 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 RPL15P61313 204 aaKnown RBP4.79□□□□□ -1.64
CLK1-203ENST00000409769 CHAF1AQ13111 956 aaPredicted RBP4.79□□□□□ -1.64
CLK1-203ENST00000409769 TBRG1Q3YBR2 411 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 CRY2Q49AN0 593 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 ATPAF1Q5TC12 328 aaPredicted RBP4.79□□□□□ -1.64
CLK1-203ENST00000409769 TMEM88Q6PEY1 159 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 ZNF474Q6S9Z5 364 aaPredicted RBP4.79□□□□□ -1.64
CLK1-203ENST00000409769 SLC39A5Q6ZMH5 540 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 ATG9AQ7Z3C6 839 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 CHD1LQ86WJ1 897 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 SLC44A2Q8IWA5 706 aaPredicted RBP4.79□□□□□ -1.64
CLK1-203ENST00000409769 UEVLDQ8IX04 471 aa4.79□□□□□ -1.64
CLK1-203ENST00000409769 CNBD1Q8NA66 436 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms