RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 KIF1CO43896 1103 aaKnown RBP4.38□□□□□ -1.71
PMS1-203ENST00000409593 WEE2P0C1S8 567 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 ENO3P13929 434 aaPredicted RBP4.38□□□□□ -1.71
PMS1-203ENST00000409593 PLA2G2AP14555 144 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 HOXD3P31249 432 aaPredicted RBP4.38□□□□□ -1.71
PMS1-203ENST00000409593 HALP42357 657 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 ZNF284Q2VY69 593 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 SLC4A8Q2Y0W8 1093 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 TBC1D9BQ66K14 1250 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 ATG9BQ674R7 924 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 IQCF1Q8N6M8 205 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 NPLQ9BXD5 320 aaPredicted RBP4.38□□□□□ -1.71
PMS1-203ENST00000409593 NLKQ9UBE8 527 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 HDAC6Q9UBN7 1215 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 SRPRBQ9Y5M8 271 aaKnown RBP4.38□□□□□ -1.71
PMS1-203ENST00000409593 HOXC6P09630 235 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 HNF1BP35680 557 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 THPOP40225 353 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 ARL4CP56559 192 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 HNF4GQ14541 408 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 ME3Q16798 604 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 INO80DQ53TQ3 878 aaPredicted RBP4.38□□□□□ -1.71
PMS1-203ENST00000409593 DENND1BQ6P3S1 775 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 GJB7Q6PEY0 223 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 ZDHHC23Q8IYP9 409 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 SETD9Q8NE22 299 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 DNAAF1Q8NEP3 725 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 RASSF8Q8NHQ8 419 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 STAMQ92783 540 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 MED30Q96HR3 178 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 PYM1Q9BRP8 204 aaKnown RBP4.38□□□□□ -1.71
PMS1-203ENST00000409593 SEZ6LQ9BYH1 1024 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 TTC12Q9H892 705 aaPredicted RBP4.38□□□□□ -1.71
PMS1-203ENST00000409593 RASSF1Q9NS23 344 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 FBXO40Q9UH90 709 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 CD207Q9UJ71 328 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 PCDHGB3Q9Y5G1 929 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 A0A096LPK6 155 aa4.37□□□□□ -1.71
PMS1-203ENST00000409593 GTPBP1O00178 669 aaKnown RBP4.37□□□□□ -1.71
PMS1-203ENST00000409593 DHX16O60231 1041 aaKnown RBP4.37□□□□□ -1.71
PMS1-203ENST00000409593 PIP5K1CO60331 668 aa4.37□□□□□ -1.71
PMS1-203ENST00000409593 TNFRSF8P28908 595 aa4.37□□□□□ -1.71
PMS1-203ENST00000409593 ABATP80404 500 aa4.37□□□□□ -1.71
PMS1-203ENST00000409593 EGR4Q05215 589 aa4.37□□□□□ -1.71
PMS1-203ENST00000409593 CRYZQ08257 329 aaKnown RBP4.37□□□□□ -1.71
PMS1-203ENST00000409593 SLC12A1Q13621 1099 aa4.37□□□□□ -1.71
PMS1-203ENST00000409593 ANKRD1Q15327 319 aa4.37□□□□□ -1.71
PMS1-203ENST00000409593 FBXO43Q4G163 708 aa4.37□□□□□ -1.71
PMS1-203ENST00000409593 LDHAL6AQ6ZMR3 332 aa4.37□□□□□ -1.71
PMS1-203ENST00000409593 TMC8Q8IU68 726 aa4.37□□□□□ -1.71
PMS1-203ENST00000409593 SPATA2LQ8IUW3 424 aaPredicted RBP4.37□□□□□ -1.71
PMS1-203ENST00000409593 HERC6Q8IVU3 1022 aa4.37□□□□□ -1.71
PMS1-203ENST00000409593 ANKRD42Q8N9B4 389 aa4.37□□□□□ -1.71
PMS1-203ENST00000409593 ELP5Q8TE02 316 aa4.37□□□□□ -1.71
PMS1-203ENST00000409593 TBC1D22AQ8WUA7 517 aa4.37□□□□□ -1.71
PMS1-203ENST00000409593 ADAMTS14Q8WXS8 1223 aa4.37□□□□□ -1.71
PMS1-203ENST00000409593 TMEM18Q96B42 140 aa4.37□□□□□ -1.71
PMS1-203ENST00000409593 HERPUD2Q9BSE4 406 aa4.37□□□□□ -1.71
PMS1-203ENST00000409593 STN1Q9H668 368 aaKnown RBP4.37□□□□□ -1.71
PMS1-203ENST00000409593 ENTPD7Q9NQZ7 604 aa4.37□□□□□ -1.71
PMS1-203ENST00000409593 WNT16Q9UBV4 365 aa4.37□□□□□ -1.71
PMS1-203ENST00000409593 IFRD1O00458 451 aaPredicted RBP4.36□□□□□ -1.71
PMS1-203ENST00000409593 KLK10O43240 276 aa4.36□□□□□ -1.71
PMS1-203ENST00000409593 SLC25A17O43808 307 aa4.36□□□□□ -1.71
PMS1-203ENST00000409593 SLC28A2O43868 658 aa4.36□□□□□ -1.71
PMS1-203ENST00000409593 ADAP00813 363 aa4.36□□□□□ -1.71
PMS1-203ENST00000409593 CKMT1AP12532 417 aa4.36□□□□□ -1.71
PMS1-203ENST00000409593 GPR12P47775 334 aa4.36□□□□□ -1.71
PMS1-203ENST00000409593 LTBQ06643 244 aa4.36□□□□□ -1.71
PMS1-203ENST00000409593 Q0VFX4 171 aa4.36□□□□□ -1.71
PMS1-203ENST00000409593 RPE65Q16518 533 aa4.36□□□□□ -1.71
PMS1-203ENST00000409593 NAPEPLDQ6IQ20 393 aa4.36□□□□□ -1.71
PMS1-203ENST00000409593 CRELD2Q6UXH1 353 aaPredicted RBP4.36□□□□□ -1.71
PMS1-203ENST00000409593 MON1BQ7L1V2 547 aa4.36□□□□□ -1.71
PMS1-203ENST00000409593 ISCA1Q9BUE6 129 aa4.36□□□□□ -1.71
PMS1-203ENST00000409593 NPFFR1Q9GZQ6 430 aa4.36□□□□□ -1.71
PMS1-203ENST00000409593 MROH8Q9H579 483 aa4.36□□□□□ -1.71
PMS1-203ENST00000409593 WDR6Q9NNW5 1121 aaKnown RBP4.36□□□□□ -1.71
PMS1-203ENST00000409593 ATP8A2Q9NTI2 1148 aa4.36□□□□□ -1.71
PMS1-203ENST00000409593 CNPY2Q9Y2B0 182 aa4.36□□□□□ -1.71
PMS1-203ENST00000409593 VWA3AA6NCI4 1184 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 KDM4EB2RXH2 506 aaPredicted RBP4.35□□□□□ -1.71
PMS1-203ENST00000409593 FAM157AC9JC47 383 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 ASAP2O43150 1006 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 ITM2AO43736 263 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 PAPSS2O95340 614 aaPredicted RBP4.35□□□□□ -1.71
PMS1-203ENST00000409593 SERPINC1P01008 464 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 PRSS2P07478 247 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 TGFB3P10600 412 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 GNLYP22749 145 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 NUDT6P53370 316 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 DSC1Q08554 894 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 FBXO47Q5MNV8 452 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 FJX1Q86VR8 437 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 OR14A16Q8NHC5 309 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 HSPH1Q92598 858 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 ZSCAN31Q96LW9 406 aaPredicted RBP4.35□□□□□ -1.71
PMS1-203ENST00000409593 WWOXQ9NZC7 414 aa4.35□□□□□ -1.71
PMS1-203ENST00000409593 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.35□□□□□ -1.71
PMS1-203ENST00000409593 RAI2Q9Y5P3 530 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms