RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 ZSCAN23Q3MJ62 389 aa12.61□□□□□ -0.39
PRAME-204ENST00000403441 C5orf22Q49AR2 442 aa12.61□□□□□ -0.39
PRAME-204ENST00000403441 PTPN20Q4JDL3 420 aa12.61□□□□□ -0.39
PRAME-204ENST00000403441 BRMS1LQ5PSV4 323 aa12.61□□□□□ -0.39
PRAME-204ENST00000403441 ACBD5Q5T8D3 534 aaPredicted RBP12.61□□□□□ -0.39
PRAME-204ENST00000403441 C22orf39Q6P5X5 142 aa12.61□□□□□ -0.39
PRAME-204ENST00000403441 LRRC31Q6UY01 552 aa12.61□□□□□ -0.39
PRAME-204ENST00000403441 ERN2Q76MJ5 926 aaKnown RBP12.61□□□□□ -0.39
PRAME-204ENST00000403441 PTAR1Q7Z6K3 402 aaPredicted RBP12.61□□□□□ -0.39
PRAME-204ENST00000403441 ABI3BPQ7Z7G0 1075 aa12.61□□□□□ -0.39
PRAME-204ENST00000403441 SETD3Q86TU7 594 aaPredicted RBP12.61□□□□□ -0.39
PRAME-204ENST00000403441 NOP9Q86U38 636 aaKnown RBP12.61□□□□□ -0.39
PRAME-204ENST00000403441 DCP2Q8IU60 420 aaKnown RBP12.61□□□□□ -0.39
PRAME-204ENST00000403441 ZDHHC17Q8IUH5 632 aa12.61□□□□□ -0.39
PRAME-204ENST00000403441 LSMEM2Q8N112 164 aa12.61□□□□□ -0.39
PRAME-204ENST00000403441 C1orf131Q8NDD1 294 aaKnown RBP12.61□□□□□ -0.39
PRAME-204ENST00000403441 DUSP23Q9BVJ7 150 aa12.61□□□□□ -0.39
PRAME-204ENST00000403441 HDAC8Q9BY41 377 aa12.61□□□□□ -0.39
PRAME-204ENST00000403441 TKTL2Q9H0I9 626 aa12.61□□□□□ -0.39
PRAME-204ENST00000403441 WDCPQ9H6R7 721 aa12.61□□□□□ -0.39
PRAME-204ENST00000403441 FAM207AQ9NSI2 230 aaPredicted RBP12.61□□□□□ -0.39
PRAME-204ENST00000403441 PIGVQ9NUD9 493 aa12.61□□□□□ -0.39
PRAME-204ENST00000403441 TMEM51Q9NW97 253 aa12.61□□□□□ -0.39
PRAME-204ENST00000403441 DNAJC28Q9NX36 388 aa12.61□□□□□ -0.39
PRAME-204ENST00000403441 IL36AQ9UHA7 158 aa12.61□□□□□ -0.39
PRAME-204ENST00000403441 STAP1Q9ULZ2 295 aa12.61□□□□□ -0.39
PRAME-204ENST00000403441 PCDHB1Q9Y5F3 818 aa12.61□□□□□ -0.39
PRAME-204ENST00000403441 CFAP46Q8IYW2 2715 aa12.61□□□□□ -0.39
PRAME-204ENST00000403441 ZNF462Q96JM2 2506 aa12.61□□□□□ -0.39
PRAME-204ENST00000403441 ASH1LQ9NR48 2969 aaKnown RBP12.61□□□□□ -0.39
PRAME-204ENST00000403441 A0A1W2PQC6 194 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 H3BM21 787 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 K7ERQ8 282 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 CSO75390 466 aaKnown RBP12.6□□□□□ -0.39
PRAME-204ENST00000403441 CNTN5O94779 1100 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 ADCY5O95622 1261 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 LSM8O95777 96 aaKnown RBP12.6□□□□□ -0.39
PRAME-204ENST00000403441 F9P00740 461 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 ERBB2P04626 1255 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 MPOP05164 745 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 OR1E1P30953 314 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 SOX5P35711 763 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 SCNN1AP37088 669 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 NEK3P51956 506 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 CLDN2P57739 230 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 POLR2FP61218 127 aaKnown RBP12.6□□□□□ -0.39
PRAME-204ENST00000403441 HNRNPKP61978 463 aaKnown RBP eCLIP12.6□□□□□ -0.391e-8■■■□□ 16.8
PRAME-204ENST00000403441 RPS21P63220 83 aaKnown RBP12.6□□□□□ -0.39
PRAME-204ENST00000403441 NOMO3P69849 1222 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 GABREP78334 506 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 SLC6A3Q01959 620 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 UBXN1Q04323 297 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 CDCP2Q5VXM1 449 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 SEL1L3Q68CR1 1132 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 KIAA1161Q6NSJ0 714 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 LINGO4Q6UY18 593 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 GCNT7Q6ZNI0 430 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 Q6ZSR6 202 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 TFAP2DQ7Z6R9 452 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 C14orf80Q86SX3 495 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 ZNF605Q86T29 641 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 ZNF397Q8NF99 534 aaPredicted RBP12.6□□□□□ -0.39
PRAME-204ENST00000403441 ARRDC3Q96B67 414 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 NAF1Q96HR8 494 aaKnown RBP12.6□□□□□ -0.39
PRAME-204ENST00000403441 APOLD1Q96LR9 279 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 PSMB7Q99436 277 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 TNKS2Q9H2K2 1166 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 CBX8Q9HC52 389 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 ARHGEF38Q9NXL2 777 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 NCKIPSDQ9NZQ3 722 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 DOCK9Q9BZ29 2069 aa12.6□□□□□ -0.39
PRAME-204ENST00000403441 ERVH48-1M5A8F1 160 aa12.59□□□□□ -0.39
PRAME-204ENST00000403441 RIOK3O14730 519 aaKnown RBP12.59□□□□□ -0.39
PRAME-204ENST00000403441 SCAMP1O15126 338 aa12.59□□□□□ -0.39
PRAME-204ENST00000403441 TEX33O43247 280 aa12.59□□□□□ -0.39
PRAME-204ENST00000403441 SMAD6O43541 496 aaKnown RBP12.59□□□□□ -0.39
PRAME-204ENST00000403441 USP12O75317 370 aa12.59□□□□□ -0.39
PRAME-204ENST00000403441 DXOO77932 396 aaKnown RBP12.59□□□□□ -0.39
PRAME-204ENST00000403441 ZIC2O95409 532 aaPredicted RBP12.59□□□□□ -0.39
PRAME-204ENST00000403441 CYP1A1P04798 512 aaPredicted RBP12.59□□□□□ -0.39
PRAME-204ENST00000403441 CHRNB2P17787 502 aa12.59□□□□□ -0.39
PRAME-204ENST00000403441 CDK11BP21127 795 aaKnown RBP12.59□□□□□ -0.39
PRAME-204ENST00000403441 CXCR3P49682 368 aa12.59□□□□□ -0.39
PRAME-204ENST00000403441 SULT1E1P49888 294 aa12.59□□□□□ -0.39
PRAME-204ENST00000403441 RNASE9P60153 205 aaKnown RBP12.59□□□□□ -0.39
PRAME-204ENST00000403441 ERVPABLB-1P60509 514 aa12.59□□□□□ -0.39
PRAME-204ENST00000403441 CDR2Q01850 454 aa12.59□□□□□ -0.39
PRAME-204ENST00000403441 TMEM259Q4ZIN3 620 aa12.59□□□□□ -0.39
PRAME-204ENST00000403441 ALFQ53S48 1182 aa12.59□□□□□ -0.39
PRAME-204ENST00000403441 TAF1BQ53T94 588 aaPredicted RBP12.59□□□□□ -0.39
PRAME-204ENST00000403441 ARSIQ5FYB1 569 aa12.59□□□□□ -0.39
PRAME-204ENST00000403441 RETSATQ6NUM9 610 aa12.59□□□□□ -0.39
PRAME-204ENST00000403441 KYAT3Q6YP21 454 aaKnown RBP12.59□□□□□ -0.39
PRAME-204ENST00000403441 ZSCAN30Q86W11 494 aa12.59□□□□□ -0.39
PRAME-204ENST00000403441 PARGQ86W56 976 aa12.59□□□□□ -0.39
PRAME-204ENST00000403441 SLC22A18ASQ8N1D0 253 aa12.59□□□□□ -0.39
PRAME-204ENST00000403441 ZNF843Q8N446 348 aa12.59□□□□□ -0.39
PRAME-204ENST00000403441 FAM181AQ8N9Y4 354 aa12.59□□□□□ -0.39
PRAME-204ENST00000403441 CHST14Q8NCH0 376 aa12.59□□□□□ -0.39
PRAME-204ENST00000403441 TMEM35BQ8NCS4 154 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms