RNA–Protein interactions for RNA: ENST00000402340.2

FAM47DP-201, Transcript of family with sequence similarity 47 member D, pseudogene, humanhuman

BASIC

Gene FAM47DP, Length 3,290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47DP-201ENST00000402340 NEMP1O14524 444 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 RNASEH2AO75792 299 aaKnown RBP12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 BEST1O76090 585 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 INHBCP55103 352 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 PKNOX1P55347 436 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 DNAJB13P59910 316 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 ITPRIPL1Q6GPH6 555 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 ARMCX2Q7L311 632 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 B3GALNT2Q8NCR0 500 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 TNIP3Q96KP6 325 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 SNX25Q9H3E2 840 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 FBXW11Q9UKB1 542 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 TLK1Q9UKI8 766 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 CXCL11O14625 94 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 GPR32O75388 356 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 AHSGP02765 367 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 FAM163BP0C2L3 166 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 KCNE1P15382 129 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 NPR3P17342 541 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 YY1P25490 414 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 NR1H2P55055 460 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 ZNF33AQ06730 810 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 CDH17Q12864 832 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 LRRC8EQ6NSJ5 796 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 CCDC117Q8IWD4 279 aaPredicted RBP12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 FAM149B1Q96BN6 582 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 ZNF560Q96MR9 790 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 CATSPER2Q96P56 530 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 MRGBPQ9NV56 204 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 SRCAPQ6ZRS2 3230 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 SDHDO14521 159 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 TRIM24O15164 1050 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 VAPBO95292 243 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 NFKB1P19838 968 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 NDUFV1P49821 464 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 ZNF135P52742 658 aaPredicted RBP12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 GRIK4Q16099 956 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 MGAT5BQ3V5L5 792 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 GJC2Q5T442 439 aaPredicted RBP12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 C6orf52Q5T4I8 152 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 HFE2Q6ZVN8 426 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 OSTM1Q86WC4 334 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 MFSD6LQ8IWD5 586 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 APPL2Q8NEU8 664 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 HMGCLL1Q8TB92 370 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 CNBD2Q96M20 576 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 TSGA13Q96PP4 275 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 TIMMDC1Q9NPL8 285 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 KCNH4Q9UQ05 1017 aa12.64□□□□□ -0.39
FAM47DP-201ENST00000402340 SMIM28A0A1B0GU29 152 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 STX16-NPEPL1H3BU86 382 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 ZNF286BP0CG31 522 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 ARCN1P48444 511 aaKnown RBP12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 PPP2R5DQ14738 602 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 GLRA4Q5JXX5 417 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 C8orf82Q6P1X6 216 aaPredicted RBP12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 CLEC20AQ6ZU45 233 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 TOP6BLQ8N6T0 577 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 SHCBP1Q8NEM2 672 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 ADAM32Q8TC27 787 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 KCTD4Q8WVF5 259 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 USP13Q92995 863 aaPredicted RBP12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 KATNBL1Q9H079 304 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 CIDEBQ9UHD4 219 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 RUVBL2Q9Y230 463 aaKnown RBP12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 CEPT1Q9Y6K0 416 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 TRPC5OSA6NMA1 111 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 H3BRB1 525 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 RECQL4O94761 1208 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 PGK1P00558 417 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 ENO3P13929 434 aaPredicted RBP12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 TKTL1P51854 596 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 TRAP1Q12931 704 aaKnown RBP12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 ART3Q13508 389 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 LRP8Q14114 963 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 TRIM25Q14258 630 aaKnown RBP12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 PTK2BQ14289 1009 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 NAPEPLDQ6IQ20 393 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 CARM1Q86X55 608 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 FTHL17Q9BXU8 183 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 TUT1Q9H6E5 874 aaKnown RBP12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 MRPL40Q9NQ50 206 aaKnown RBP12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 HACD3Q9P035 362 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 RNF11Q9Y3C5 154 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 NRCAMQ92823 1304 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 C7orf72A4D263 438 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 PHGDHO43175 533 aaKnown RBP12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 PSMD3O43242 534 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 MSX2P35548 267 aaPredicted RBP12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 TAF6P49848 677 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 USP10Q14694 798 aaKnown RBP12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 NOTUMQ6P988 496 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 LINC00523Q86TU6 105 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 PRPF18Q99633 342 aaKnown RBP12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 APBA2Q99767 749 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 GRIP2Q9C0E4 1043 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 NXF3Q9H4D5 531 aaKnown RBP12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 VTA1Q9NP79 307 aa12.63□□□□□ -0.39
FAM47DP-201ENST00000402340 IPO11Q9UI26 975 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms