RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 RRN3P2A6NIE6 340 aa17.28■□□□□ 0.36
SNRNP70-202ENST00000401730 XPOTO43592 962 aaKnown RBP17.28■□□□□ 0.36
SNRNP70-202ENST00000401730 CSPG5O95196 566 aa17.28■□□□□ 0.36
SNRNP70-202ENST00000401730 SBK3P0C264 359 aa17.28■□□□□ 0.36
SNRNP70-202ENST00000401730 VCLP18206 1134 aa17.28■□□□□ 0.36
SNRNP70-202ENST00000401730 FLOT2Q14254 428 aa17.28■□□□□ 0.36
SNRNP70-202ENST00000401730 ARL13BQ3SXY8 428 aa17.28■□□□□ 0.36
SNRNP70-202ENST00000401730 FSCBQ5H9T9 825 aa17.28■□□□□ 0.36
SNRNP70-202ENST00000401730 SH2D4BQ5SQS7 431 aa17.28■□□□□ 0.36
SNRNP70-202ENST00000401730 ZNF470Q6ECI4 717 aa17.28■□□□□ 0.36
SNRNP70-202ENST00000401730 GK5Q6ZS86 529 aa17.28■□□□□ 0.36
SNRNP70-202ENST00000401730 IFT43Q96FT9 208 aa17.28■□□□□ 0.36
SNRNP70-202ENST00000401730 C1orf21Q9H246 121 aa17.28■□□□□ 0.36
SNRNP70-202ENST00000401730 VCX3BQ9H321 246 aa17.28■□□□□ 0.36
SNRNP70-202ENST00000401730 VCX3AQ9NNX9 186 aa17.28■□□□□ 0.36
SNRNP70-202ENST00000401730 COL1A2P08123 1366 aa17.28■□□□□ 0.36
SNRNP70-202ENST00000401730 CRABP2P29373 138 aa17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 ART3Q13508 389 aa17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 ZC3HC1Q86WB0 502 aaKnown RBP17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 SLC45A3Q96JT2 553 aa17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 GBA3Q9H227 469 aa17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 PREBQ9HCU5 417 aa17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 CASS4Q9NQ75 786 aa17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 DLX3O60479 287 aa17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 RPL14P50914 215 aaKnown RBP17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 PPIDQ08752 370 aaKnown RBP17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 RBM20Q5T481 1227 aaKnown RBP17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 SATL1Q86VE3 508 aa17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 PDSS2Q86YH6 399 aa17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 BHLHE22Q8NFJ8 381 aaPredicted RBP17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 GPR152Q8TDT2 470 aa17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 PPP2R3CQ969Q6 453 aa17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 CENPKQ9BS16 269 aa17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 SPATA16Q9BXB7 569 aa17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 PCDHAC1Q9H158 963 aa17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 EIF2B3Q9NR50 452 aaKnown RBP17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 TMLHEQ9NVH6 421 aa17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 OXSMQ9NWU1 459 aa17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 GMPR2Q9P2T1 348 aaKnown RBP17.27■□□□□ 0.36
SNRNP70-202ENST00000401730 PGK1P00558 417 aa17.27■□□□□ 0.35
SNRNP70-202ENST00000401730 SLC4A1P02730 911 aa17.27■□□□□ 0.35
SNRNP70-202ENST00000401730 SLC35E2BP0CK96 405 aa17.27■□□□□ 0.35
SNRNP70-202ENST00000401730 PNPLA4P41247 253 aa17.27■□□□□ 0.35
SNRNP70-202ENST00000401730 GRIA2P42262 883 aa17.27■□□□□ 0.35
SNRNP70-202ENST00000401730 DPP6P42658 865 aa17.27■□□□□ 0.35
SNRNP70-202ENST00000401730 TAS2R39P59534 338 aa17.27■□□□□ 0.35
SNRNP70-202ENST00000401730 PITRM1Q5JRX3 1037 aa17.27■□□□□ 0.35
SNRNP70-202ENST00000401730 SREK1Q8WXA9 508 aaKnown RBP17.27■□□□□ 0.35
SNRNP70-202ENST00000401730 MYLPFQ96A32 169 aa17.27■□□□□ 0.35
SNRNP70-202ENST00000401730 KLHL5Q96PQ7 755 aa17.27■□□□□ 0.35
SNRNP70-202ENST00000401730 SGIP1Q9BQI5 828 aa17.27■□□□□ 0.35
SNRNP70-202ENST00000401730 SF3B1O75533 1304 aaKnown RBP eCLIP17.26■□□□□ 0.351e-6■■■■■ 35.2
SNRNP70-202ENST00000401730 HNRNPRO43390 633 aaKnown RBP17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 CCNT2O60583 730 aaKnown RBP17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 PSEN2P49810 448 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 FOLH1Q04609 750 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 RALGDSQ12967 914 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 CYLC2Q14093 348 aaPredicted RBP17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 PPP1R3AQ16821 1122 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 LIN52Q52LA3 116 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 TIGD5Q53EQ6 642 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 PGM2L1Q6PCE3 622 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 CNSTQ6PJW8 725 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 CYP2R1Q6VVX0 501 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 SCN4BQ8IWT1 228 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 CENPLQ8N0S6 344 aaPredicted RBP17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 ABTB1Q969K4 478 aaPredicted RBP17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 NT5C3BQ969T7 300 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 TEKT5Q96M29 485 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 FSD1LQ9BXM9 530 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 TRPV6Q9H1D0 765 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 IL1RL2Q9HB29 575 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 SPON1Q9HCB6 807 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 DMAP1Q9NPF5 467 aaPredicted RBP17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 DTNAQ9Y4J8 743 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 FAM95CA0A1B0GW59 222 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 HDAC3O15379 428 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 GRID2O43424 1007 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 PFDN1O60925 122 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 KCNA5P22460 613 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 ALDH1A3P47895 512 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 CDH17Q12864 832 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 NRF1Q16656 503 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 INSCQ1MX18 579 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 ANO4Q32M45 955 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 ST13P4Q8IZP2 240 aaPredicted RBP17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 ICA1LQ8NDH6 482 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 SLC2A13Q96QE2 648 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 TNFRSF12AQ9NP84 129 aa17.26■□□□□ 0.35
SNRNP70-202ENST00000401730 RBM22Q9NW64 420 aaKnown RBP eCLIP17.26■□□□□ 0.357e-8■■■□□ 17.8
SNRNP70-202ENST00000401730 OR51F1A6NGY5 319 aa17.25■□□□□ 0.35
SNRNP70-202ENST00000401730 KCNU1A8MYU2 1149 aa17.25■□□□□ 0.35
SNRNP70-202ENST00000401730 CEACAM7Q14002 265 aa17.25■□□□□ 0.35
SNRNP70-202ENST00000401730 CYS1Q717R9 158 aa17.25■□□□□ 0.35
SNRNP70-202ENST00000401730 PLEKHH3Q7Z736 793 aa17.25■□□□□ 0.35
SNRNP70-202ENST00000401730 KYQ8NBH2 561 aa17.25■□□□□ 0.35
SNRNP70-202ENST00000401730 SHCBP1Q8NEM2 672 aa17.25■□□□□ 0.35
SNRNP70-202ENST00000401730 SLC39A3Q9BRY0 314 aa17.25■□□□□ 0.35
SNRNP70-202ENST00000401730 GPAMQ9HCL2 828 aa17.25■□□□□ 0.35
SNRNP70-202ENST00000401730 DDX18Q9NVP1 670 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms