RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 NXPE3Q969Y0 559 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 CHFRQ96EP1 664 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 TEKT5Q96M29 485 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 CDK5RAP1Q96SZ6 601 aaKnown RBP11.89□□□□□ -0.51
SKA3-203ENST00000400018 FICDQ9BVA6 458 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 CIPCQ9C0C6 399 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 PPARGC1AQ9UBK2 798 aaKnown RBP11.89□□□□□ -0.51
SKA3-203ENST00000400018 CLUHO75153 1309 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 E2F8A0AVK6 867 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 C5orf60A6NFR6 353 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 MATN3O15232 486 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 GCATO75600 419 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 HLA-EP13747 358 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 PPP3CCP48454 512 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 KPNA1P52294 538 aaPredicted RBP11.88□□□□□ -0.51
SKA3-203ENST00000400018 OXCT1P55809 520 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 CORO7P57737 925 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 GPX6P59796 221 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 MARC1Q5VT66 337 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 DNAAF3Q8N9W5 541 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 IRF7Q92985 503 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 VPS37BQ9H9H4 285 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 NOD2Q9HC29 1040 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 SPHK2Q9NRA0 654 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 SYBUQ9NX95 663 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 WHRNQ9P202 907 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 PAK5Q9P286 719 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 STK39Q9UEW8 545 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 GPR39O43194 453 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 PIGNO95427 931 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 CYP17A1P05093 508 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 CREB1P16220 341 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 SLC8A1P32418 973 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 MAGEA4P43358 317 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 MMP13P45452 471 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 METAP1P53582 386 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 TMPRSS15P98073 1019 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 LMNB2Q03252 620 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 XRCC4Q13426 336 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 LBRQ14739 615 aaKnown RBP11.88□□□□□ -0.51
SKA3-203ENST00000400018 DHCR24Q15392 516 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 HIF1AQ16665 826 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 RYBPQ8N488 228 aaPredicted RBP11.88□□□□□ -0.51
SKA3-203ENST00000400018 LRRC45Q96CN5 670 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 PSD3Q9NYI0 1048 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 CHKBQ9Y259 395 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 CARNS1A5YM72 827 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 POC1B-GALNT4F8VUJ3 575 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 AURKAO14965 403 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 CLDN11O75508 207 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 MMP2P08253 660 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 HOXA9P31269 272 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 CYTH1Q15438 398 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 ATAT1Q5SQI0 421 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 CEP85LQ5SZL2 805 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 TTC19Q6DKK2 380 aaPredicted RBP11.88□□□□□ -0.51
SKA3-203ENST00000400018 ALG14Q96F25 216 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 ATXN7L3BQ96GX2 97 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 CHRAC1Q9NRG0 131 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 SLC2A6Q9UGQ3 507 aa11.88□□□□□ -0.51
SKA3-203ENST00000400018 USP15Q9Y4E8 981 aaPredicted RBP11.88□□□□□ -0.51
SKA3-203ENST00000400018 GRXCR2A6NFK2 248 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 ZNF487B1APH4 448 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 PRRT4C9JH25 899 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 PLK4O00444 970 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 GFRA2O00451 464 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 RIPK2O43353 540 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 TMCC1O94876 653 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 MX2P20592 715 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 CCNCP24863 283 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 GDI1P31150 447 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 MNAT1P51948 309 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 PPP1R21Q6ZMI0 780 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 SMARCD2Q92925 531 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 RTP4Q96DX8 246 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 MFSD3Q96ES6 412 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 ACOX2Q99424 681 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 CDX2Q99626 313 aaPredicted RBP11.87□□□□□ -0.51
SKA3-203ENST00000400018 TXLNGYQ9BZA5 131 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 PDFQ9HBH1 243 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 GLOD4Q9HC38 313 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 HPS4Q9NQG7 708 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 LIMD1Q9UGP4 676 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 EVLQ9UI08 416 aaPredicted RBP11.87□□□□□ -0.51
SKA3-203ENST00000400018 SHOC2Q9UQ13 582 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 OR51B4Q9Y5P0 310 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 NUMBLQ9Y6R0 609 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 MYLKQ15746 1914 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 CXorf49A8MYA2 514 aaPredicted RBP11.87□□□□□ -0.51
SKA3-203ENST00000400018 PRAMEF11O60813 436 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 PRSS56P0CW18 603 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 ZNF235Q14590 738 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 AAK1Q2M2I8 961 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 DGKKQ5KSL6 1271 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 PDE12Q6L8Q7 609 aaKnown RBP11.87□□□□□ -0.51
SKA3-203ENST00000400018 VSIG1Q86XK7 387 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 CAMK1DQ8IU85 385 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 CYP4X1Q8N118 509 aa11.87□□□□□ -0.51
SKA3-203ENST00000400018 ZCCHC9Q8N567 271 aaKnown RBP11.87□□□□□ -0.51
SKA3-203ENST00000400018 ATP11CQ8NB49 1132 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms