RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 PCDH15Q96QU1 1955 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 H0Y858 1186 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 PSMD11O00231 422 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 PSMD3O43242 534 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 LRP4O75096 1905 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 ITGAVP06756 1048 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 GABRG2P18507 467 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 AMPD1P23109 780 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 STIP1P31948 543 aaKnown RBP7.65□□□□□ -1.18
USP16-204ENST00000399976 LMNB2Q03252 620 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 LBRQ14739 615 aaKnown RBP7.65□□□□□ -1.18
USP16-204ENST00000399976 CYTH1Q15438 398 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 SMTNL2Q2TAL5 461 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 LRRK1Q38SD2 2015 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 KCNT1Q5JUK3 1230 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 SERPINA13PQ6UXR4 307 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 GPR161Q8N6U8 529 aaKnown RBP7.65□□□□□ -1.18
USP16-204ENST00000399976 NAT16Q8N8M0 369 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 TXNDC5Q8NBS9 432 aaKnown RBP7.65□□□□□ -1.18
USP16-204ENST00000399976 FLCNQ8NFG4 579 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 TSTD1Q8NFU3 115 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 OR2A12Q8NGT7 310 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 ALG3Q92685 438 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 LYSMD1Q96S90 227 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 HEPHQ9BQS7 1158 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 CALN1Q9BXU9 219 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 SP110Q9HB58 689 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 GPATCH2LQ9NWQ4 482 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 GUCA1BQ9UMX6 200 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 HCN4Q9Y3Q4 1203 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 HYOU1Q9Y4L1 999 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 SNX10Q9Y5X0 201 aa7.65□□□□□ -1.18
USP16-204ENST00000399976 A0A0D9SEW6 157 aa7.65□□□□□ -1.19
USP16-204ENST00000399976 C5orf60A6NFR6 353 aa7.65□□□□□ -1.19
USP16-204ENST00000399976 ERI2A8K979 691 aaKnown RBP7.65□□□□□ -1.19
USP16-204ENST00000399976 BUB1O43683 1085 aa7.65□□□□□ -1.19
USP16-204ENST00000399976 PI15O43692 258 aa7.65□□□□□ -1.19
USP16-204ENST00000399976 TMCC1O94876 653 aa7.65□□□□□ -1.19
USP16-204ENST00000399976 SATB1Q01826 763 aa7.65□□□□□ -1.19
USP16-204ENST00000399976 MESP2Q0VG99 397 aa7.65□□□□□ -1.19
USP16-204ENST00000399976 ANGPT1Q15389 498 aa7.65□□□□□ -1.19
USP16-204ENST00000399976 CCNG2Q16589 344 aa7.65□□□□□ -1.19
USP16-204ENST00000399976 DCAF12L1Q5VU92 463 aa7.65□□□□□ -1.19
USP16-204ENST00000399976 IL31Q6EBC2 164 aa7.65□□□□□ -1.19
USP16-204ENST00000399976 NYAP1Q6ZVC0 841 aa7.65□□□□□ -1.19
USP16-204ENST00000399976 SLC13A5Q86YT5 568 aaPredicted RBP7.65□□□□□ -1.19
USP16-204ENST00000399976 CHPFQ8IZ52 775 aa7.65□□□□□ -1.19
USP16-204ENST00000399976 DENND6BQ8NEG7 585 aa7.65□□□□□ -1.19
USP16-204ENST00000399976 OR7D4Q8NG98 312 aa7.65□□□□□ -1.19
USP16-204ENST00000399976 TFB1MQ8WVM0 346 aaKnown RBP7.65□□□□□ -1.19
USP16-204ENST00000399976 KRT35Q92764 455 aa7.65□□□□□ -1.19
USP16-204ENST00000399976 P3H4Q92791 437 aa7.65□□□□□ -1.19
USP16-204ENST00000399976 PLK2Q9NYY3 685 aa7.65□□□□□ -1.19
USP16-204ENST00000399976 IL36AQ9UHA7 158 aa7.65□□□□□ -1.19
USP16-204ENST00000399976 SNX12Q9UMY4 172 aa7.65□□□□□ -1.19
USP16-204ENST00000399976 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.65□□□□□ -1.19
USP16-204ENST00000399976 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.64□□□□□ -1.19
USP16-204ENST00000399976 MACROD2A1Z1Q3 448 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 RGSL1A5PLK6 1076 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 AXIN1O15169 862 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 PLRG1O43660 514 aaKnown RBP7.64□□□□□ -1.19
USP16-204ENST00000399976 OPHN1O60890 802 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 GCATO75600 419 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 PDGFBP01127 241 aaPredicted RBP7.64□□□□□ -1.19
USP16-204ENST00000399976 CD48P09326 243 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 PSMA3P25788 255 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 ACVRL1P37023 503 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 DLG2Q15700 870 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 P3H1Q32P28 736 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 KIAA1161Q6NSJ0 714 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 TMEM92Q6UXU6 159 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 SYDE1Q6ZW31 735 aaPredicted RBP7.64□□□□□ -1.19
USP16-204ENST00000399976 TFAP2DQ7Z6R9 452 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 SRLQ86TD4 932 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 CIR1Q86X95 450 aaPredicted RBP7.64□□□□□ -1.19
USP16-204ENST00000399976 PRCCQ92733 491 aaPredicted RBP7.64□□□□□ -1.19
USP16-204ENST00000399976 MRGPRX1Q96LB2 322 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 LENG8Q96PV6 779 aaPredicted RBP7.64□□□□□ -1.19
USP16-204ENST00000399976 CIPCQ9C0C6 399 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 POLR1EQ9GZS1 481 aaKnown RBP7.64□□□□□ -1.19
USP16-204ENST00000399976 DMTF1Q9Y222 760 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 WASF2Q9Y6W5 498 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 PRUNE2Q8WUY3 3088 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 AP3B1O00203 1094 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 RHOBTB1O94844 696 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 PYGMP11217 842 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 KRT10P13645 584 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 COL9A1P20849 921 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 CHRNA3P32297 505 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 TIE1P35590 1138 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 RECQLP46063 649 aaPredicted RBP7.64□□□□□ -1.19
USP16-204ENST00000399976 MYLK3Q32MK0 819 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 TMEM52BQ4KMG9 183 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 USP39Q53GS9 565 aaKnown RBP7.64□□□□□ -1.19
USP16-204ENST00000399976 ZNF805Q5CZA5 627 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 MARC1Q5VT66 337 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 ITPRIPL1Q6GPH6 555 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 NCEH1Q6PIU2 408 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 Q6ZS52 159 aa7.64□□□□□ -1.19
USP16-204ENST00000399976 RFX6Q8HWS3 928 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms