RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 LRRC8DQ7L1W4 858 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 ZNF467Q7Z7K2 595 aaPredicted RBP14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 OOSP2Q86WS3 158 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 TRIM48Q8IWZ4 208 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 HJURPQ8NCD3 748 aaPredicted RBP14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 DQX1Q8TE96 717 aaKnown RBP14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 KCTD4Q8WVF5 259 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 BTN2A3PQ96KV6 586 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 KCTD14Q9BQ13 255 aaPredicted RBP14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 SDCBP2Q9H190 292 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 THG1LQ9NWX6 298 aaKnown RBP14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 OPTCQ9UBM4 332 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 RAP2CQ9Y3L5 183 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 TRAV19A0A0A6YYK7 116 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 PSMD12O00232 456 aaPredicted RBP14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 ELNP15502 786 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 FASP25445 335 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 GRK3P35626 688 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 GRIA4P48058 902 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 WASHC5Q12768 1159 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 STARD3Q14849 445 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 C11orf96Q7Z7L8 435 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 DHFR2Q86XF0 187 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 SLC7A5P2Q9GIP4 190 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 ARHGEF4Q9NR80 690 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 NUP188Q5SRE5 1749 aa14.39□□□□□ -0.11
PCDHGA11-201ENST00000398587 C5orf60A6NFR6 353 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 KPNA3O00505 521 aaPredicted RBP14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 SLC9A3R1O14745 358 aaPredicted RBP14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 SEPT4O43236 478 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 PDE5AO76074 875 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 CD48P09326 243 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 LBPP18428 481 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 OR1D2P34982 312 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 NAA20P61599 178 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 CTBP1Q13363 440 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 METTL3Q86U44 580 aaKnown RBP14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 SYTL1Q8IYJ3 562 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 PTGR2Q8N8N7 351 aaPredicted RBP14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 MCRS1Q96EZ8 462 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 PLEKHA8Q96JA3 519 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 TBC1D10AQ9BXI6 508 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 SELENONQ9NZV5 590 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 LRCH1Q9Y2L9 728 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 HNRNPCL2B2RXH8 293 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 IFRD1O00458 451 aaPredicted RBP14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 ZCCHC18P0CG32 403 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 HOXD13P35453 343 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 GPD2P43304 727 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 CLCNKBP51801 687 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 TAF10Q12962 218 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 KCNA10Q16322 511 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 PTPRNQ16849 979 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 BBS7Q8IWZ6 715 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 RNF148Q8N7C7 305 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 SLC9A7Q96T83 725 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 ASB8Q9H765 288 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 GRHL1Q9NZI5 618 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 STAU1O95793 577 aaKnown RBP14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 POLR2EP19388 210 aaKnown RBP14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 WARSP23381 471 aaKnown RBP14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 L1CAMP32004 1257 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 GPC1P35052 558 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 PPM1AP35813 382 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 ARL4DP49703 201 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 ZC3H12BQ5HYM0 836 aaKnown RBP14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 DSG4Q86SJ6 1040 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 NDRG1Q92597 394 aaKnown RBP14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 RNPEPL1Q9HAU8 725 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 IL1RAPL1Q9NZN1 696 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 ZBTB14O43829 449 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 CPSF4O95639 269 aaKnown RBP14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 LPOP22079 712 aaPredicted RBP14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 TRMT11Q7Z4G4 463 aaKnown RBP14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 LRRC15Q8TF66 581 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 HDAC10Q969S8 669 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 OTULINQ96BN8 352 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 TM6SF2Q9BZW4 377 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 WDR41Q9HAD4 459 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 COMMD8Q9NX08 183 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 XPR1Q9UBH6 696 aa14.38□□□□□ -0.11
PCDHGA11-201ENST00000398587 A0A1W2PQH9 124 aa14.37□□□□□ -0.11
PCDHGA11-201ENST00000398587 AGPSO00116 658 aa14.37□□□□□ -0.11
PCDHGA11-201ENST00000398587 SEC22BO75396 215 aa14.37□□□□□ -0.11
PCDHGA11-201ENST00000398587 ARIH2O95376 493 aa14.37□□□□□ -0.11
PCDHGA11-201ENST00000398587 PCNAP12004 261 aa14.37□□□□□ -0.11
PCDHGA11-201ENST00000398587 RAD23AP54725 363 aa14.37□□□□□ -0.11
PCDHGA11-201ENST00000398587 LIPMQ5VYY2 423 aa14.37□□□□□ -0.11
PCDHGA11-201ENST00000398587 ZC3H3Q8IXZ2 948 aaKnown RBP14.37□□□□□ -0.11
PCDHGA11-201ENST00000398587 NIPA2Q8N8Q9 360 aa14.37□□□□□ -0.11
PCDHGA11-201ENST00000398587 ATAD1Q8NBU5 361 aa14.37□□□□□ -0.11
PCDHGA11-201ENST00000398587 DPEP3Q9H4B8 488 aa14.37□□□□□ -0.11
PCDHGA11-201ENST00000398587 ATP13A3Q9H7F0 1226 aa14.37□□□□□ -0.11
PCDHGA11-201ENST00000398587 ASAH2Q9NR71 780 aa14.37□□□□□ -0.11
PCDHGA11-201ENST00000398587 IMPAD1Q9NX62 359 aa14.37□□□□□ -0.11
PCDHGA11-201ENST00000398587 SLC17A7Q9P2U7 560 aa14.37□□□□□ -0.11
PCDHGA11-201ENST00000398587 C15orf41Q9Y2V0 281 aa14.37□□□□□ -0.11
PCDHGA11-201ENST00000398587 CCDC154A6NI56 674 aa14.37□□□□□ -0.11
PCDHGA11-201ENST00000398587 NT5C1B-RDH14C9J2C7 533 aa14.37□□□□□ -0.11
PCDHGA11-201ENST00000398587 MSI1O43347 362 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms