RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 RAP1GAPP47736 663 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 AVPR1BP47901 424 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 ARRB1P49407 418 aaPredicted RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 SESN2P58004 480 aaPredicted RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 KCNMA1Q12791 1236 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 CUL2Q13617 745 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 CAMK1Q14012 370 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 MAPK14Q16539 360 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 DDR2Q16832 855 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 CCDC142Q17RM4 750 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 FNBP1LQ5T0N5 605 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 DEPDC4Q8N2C3 294 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 ZNF513Q8N8E2 541 aaPredicted RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 PNLDC1Q8NA58 520 aaKnown RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 TBC1D16Q8TBP0 767 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 GRIN3AQ8TCU5 1115 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 BRSK1Q8TDC3 778 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 PGAP3Q96FM1 320 aaPredicted RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 ZFRQ96KR1 1074 aaKnown RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 FAM118BQ9BPY3 351 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 EPB41L1Q9H4G0 881 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 ELP3Q9H9T3 547 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 PNPLA8Q9NP80 782 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 CCNB1IP1Q9NPC3 277 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 UPB1Q9UBR1 384 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 CDH9Q9ULB4 789 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 SNX6Q9UNH7 406 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 RNF24Q9Y225 148 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 POC1B-GALNT4F8VUJ3 575 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 STX16-NPEPL1H3BU86 382 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 XPO1O14980 1071 aaKnown RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 KCNJ13O60928 360 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 PRR5P85299 388 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 GK3PQ14409 553 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 FAM98BQ52LJ0 330 aaKnown RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 FNDC3BQ53EP0 1204 aaKnown RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 TOR1AIP1Q5JTV8 583 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 C1orf146Q5VVC0 180 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 CHPFQ8IZ52 775 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 RBFAQ8N0V3 343 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 FBXL16Q8N461 479 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 DNAJC9Q8WXX5 260 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 IRGQQ8WZA9 623 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 MOAP1Q96BY2 351 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 NSUN4Q96CB9 384 aaKnown RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 CNDP1Q96KN2 507 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 IP6K3Q96PC2 410 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 C17orf80Q9BSJ5 609 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 DUSP23Q9BVJ7 150 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 TBC1D23Q9NUY8 699 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 FBXO9Q9UK97 447 aaPredicted RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 PCDHA7Q9UN72 937 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 GIT1Q9Y2X7 761 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 ZNF451Q9Y4E5 1061 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 PCDHA13Q9Y5I0 950 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 ASTN1O14525 1302 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 APBB3O95704 486 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 OTCP00480 354 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 CATP04040 527 aaKnown RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 GJB1P08034 283 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 EIF4BP23588 611 aaKnown RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 HOXA13P31271 388 aaPredicted RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 SOAT1P35610 550 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 CENPAP49450 140 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 DLG1Q12959 904 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 GRM2Q14416 872 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 MGAT5BQ3V5L5 792 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 SLC25A25Q6KCM7 469 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 MZT2AQ6P582 158 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 DNM1P34Q6PK57 102 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 RPTNQ6XPR3 784 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 SCARA5Q6ZMJ2 495 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 TDRD5Q8NAT2 981 aaKnown RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 SPPL2BQ8TCT7 592 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 VMP1Q96GC9 406 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 PNMA5Q96PV4 448 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 CGRRF1Q99675 332 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 FEM1AQ9BSK4 669 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 IDI2Q9BXS1 227 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 SERHL2Q9H4I8 314 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 SERHLQ9NQF3 203 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 SETD4Q9NVD3 440 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 EXD2Q9NVH0 621 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 CNOT8Q9UFF9 292 aaKnown RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 GTF3C4Q9UKN8 822 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 GSTK1Q9Y2Q3 226 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 Q9Y3F1 56 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 ZNF780BQ9Y6R6 833 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 H3BRB1 525 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 PQBP1O60828 265 aaKnown RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 REM1O75628 298 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 TSPAN9O75954 239 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 PDYNP01213 254 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 HMBSP08397 361 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 HNRNPA1P09651 372 aaKnown RBP eCLIP2.76□□□□□ -1.97
CHD9-202ENST00000398510 PDGFRAP16234 1089 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 HOXB9P17482 250 aaPredicted RBP2.76□□□□□ -1.97
CHD9-202ENST00000398510 FGFR3P22607 806 aa2.76□□□□□ -1.97
CHD9-202ENST00000398510 MAP2K2P36507 400 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms