RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 ZDHHC18Q9NUE0 388 aa17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 KLHL8Q9P2G9 620 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 VPS51Q9UID3 782 aa17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 VPS28Q9UK41 221 aa17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 HPCAL4Q9UM19 191 aa17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 SIT1Q9Y3P8 196 aa17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 KANSL1LA0AUZ9 987 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 CBX4O00257 560 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 ARNTLO00327 626 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 CD160O95971 181 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 HLA-DQB2P05538 268 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 MCM3P25205 808 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 GDI1P31150 447 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 RENBPP51606 427 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 ITGA8P53708 1063 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 RUNX3Q13761 415 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 FUT11Q495W5 492 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 PITRM1Q5JRX3 1037 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 RNASEH2BQ5TBB1 312 aaKnown RBP17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 TMCO4Q5TGY1 634 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 MARC1Q5VT66 337 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 HIBCHQ6NVY1 386 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 LEKR1Q6ZMV7 388 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 C12orf40Q86WS4 652 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 CPA6Q8N4T0 437 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 TAB3Q8N5C8 712 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 NAT16Q8N8M0 369 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 BBOF1Q8ND07 529 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 CPT1BQ92523 772 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 AGAP3Q96P47 875 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 XPO6Q96QU8 1125 aaKnown RBP17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 TRMT61BQ9BVS5 477 aaKnown RBP17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 ETNK1Q9HBU6 452 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 RAB6BQ9NRW1 208 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 RBM22Q9NW64 420 aaKnown RBP eCLIP17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 UBA2Q9UBT2 640 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 GGA2Q9UJY4 613 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 TPX2Q9ULW0 747 aaKnown RBP17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 ATP8A1Q9Y2Q0 1164 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 FARP1Q9Y4F1 1045 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 ACTL7AQ9Y615 435 aa17.23■□□□□ 0.35
TSPAN4-205ENST00000397406 CISD3P0C7P0 127 aa17.22■□□□□ 0.35
TSPAN4-205ENST00000397406 PABPC1P11940 636 aaKnown RBP17.22■□□□□ 0.35
TSPAN4-205ENST00000397406 NFKB1P19838 968 aa17.22■□□□□ 0.35
TSPAN4-205ENST00000397406 TARSP26639 723 aaKnown RBP17.22■□□□□ 0.35
TSPAN4-205ENST00000397406 PSMB4P28070 264 aa17.22■□□□□ 0.35
TSPAN4-205ENST00000397406 LBRQ14739 615 aaKnown RBP17.22■□□□□ 0.35
TSPAN4-205ENST00000397406 PARP6Q2NL67 630 aa17.22■□□□□ 0.35
TSPAN4-205ENST00000397406 FAXCQ5TGI0 409 aa17.22■□□□□ 0.35
TSPAN4-205ENST00000397406 GSPT2Q8IYD1 628 aaKnown RBP17.22■□□□□ 0.35
TSPAN4-205ENST00000397406 FBXO25Q8TCJ0 367 aa17.22■□□□□ 0.35
TSPAN4-205ENST00000397406 NSMCE1Q8WV22 266 aa17.22■□□□□ 0.35
TSPAN4-205ENST00000397406 GORASP1Q9BQQ3 440 aa17.22■□□□□ 0.35
TSPAN4-205ENST00000397406 C2orf49Q9BVC5 232 aaPredicted RBP17.22■□□□□ 0.35
TSPAN4-205ENST00000397406 FAM129AQ9BZQ8 928 aa17.22■□□□□ 0.35
TSPAN4-205ENST00000397406 GBA3Q9H227 469 aa17.22■□□□□ 0.35
TSPAN4-205ENST00000397406 LTB4R2Q9NPC1 389 aa17.22■□□□□ 0.35
TSPAN4-205ENST00000397406 DNAJC17Q9NVM6 304 aaKnown RBP17.22■□□□□ 0.35
TSPAN4-205ENST00000397406 NFU1Q9UMS0 254 aa17.22■□□□□ 0.35
TSPAN4-205ENST00000397406 ZFHX2Q9C0A1 2572 aaPredicted RBP17.22■□□□□ 0.35
TSPAN4-205ENST00000397406 ANKRD36A6QL64 1941 aa17.22■□□□□ 0.35
TSPAN4-205ENST00000397406 TRIM24O15164 1050 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 TULP3O75386 442 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 FDFT1P37268 417 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 MAGEA6P43360 314 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 MMP13P45452 471 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 DGKGP49619 791 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 PLTPP55058 493 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 BASP1P80723 227 aaKnown RBP17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 PRKCQQ04759 706 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 CALCOCO2Q13137 446 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 SEMA5AQ13591 1074 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 KCNJ11Q14654 390 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 RFTN1Q14699 578 aaPredicted RBP17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 ANKRD22Q5VYY1 191 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 ITPRIPL1Q6GPH6 555 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 TPRG1Q6ZUI0 275 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 PCGF5Q86SE9 256 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 PPIL6Q8IXY8 311 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 PGBD5Q8N414 524 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 NAT8LQ8N9F0 302 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 ACDQ96AP0 544 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 GLOD4Q9HC38 313 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 GTSE1Q9NYZ3 720 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 RSPH14Q9UHP6 348 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 ANAPC5Q9UJX4 755 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 SLC27A6Q9Y2P4 619 aa17.21■□□□□ 0.35
TSPAN4-205ENST00000397406 CXorf51AA0A1B0GTR3 108 aa17.21■□□□□ 0.34
TSPAN4-205ENST00000397406 TCRBV7S3A2A0A539 114 aa17.21■□□□□ 0.34
TSPAN4-205ENST00000397406 NDC80O14777 642 aa17.21■□□□□ 0.34
TSPAN4-205ENST00000397406 CAV1Q03135 178 aa17.21■□□□□ 0.34
TSPAN4-205ENST00000397406 NR1H3Q13133 447 aa17.21■□□□□ 0.34
TSPAN4-205ENST00000397406 HLTFQ14527 1009 aaKnown RBP eCLIP17.21■□□□□ 0.34
TSPAN4-205ENST00000397406 DMC1Q14565 340 aa17.21■□□□□ 0.34
TSPAN4-205ENST00000397406 MORF4L2Q15014 288 aa17.21■□□□□ 0.34
TSPAN4-205ENST00000397406 CYTH1Q15438 398 aa17.21■□□□□ 0.34
TSPAN4-205ENST00000397406 TMEM215Q68D42 235 aa17.21■□□□□ 0.34
TSPAN4-205ENST00000397406 LINGO4Q6UY18 593 aa17.21■□□□□ 0.34
TSPAN4-205ENST00000397406 ADIPOR2Q86V24 386 aa17.21■□□□□ 0.34
TSPAN4-205ENST00000397406 HOOK3Q86VS8 718 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms