RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 ZC3H10Q96K80 434 aaKnown RBP12.47□□□□□ -0.41
SMU1-201ENST00000397149 TMEM68Q96MH6 324 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 GANQ9H2C0 597 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 JMJD4Q9H9V9 463 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 HCN1O60741 890 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 CBFA2T3O75081 653 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 KRT36O76013 467 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 PTPN9P43378 593 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 NEK3P51956 506 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 APTXQ7Z2E3 356 aaKnown RBP12.47□□□□□ -0.41
SMU1-201ENST00000397149 ARHGAP22Q7Z5H3 698 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 C12orf56Q8IXR9 622 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 LSM14AQ8ND56 463 aaKnown RBP12.47□□□□□ -0.41
SMU1-201ENST00000397149 CCDC120Q96HB5 630 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 C1orf50Q9BV19 199 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 ANKARQ7Z5J8 1434 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 LSM1O15116 133 aaKnown RBP12.47□□□□□ -0.41
SMU1-201ENST00000397149 DCXO43602 365 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 RHOBTB3O94955 611 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 VBP1P61758 197 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 PPP1R15BQ5SWA1 713 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 TMEM63BQ5T3F8 832 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 SHC4Q6S5L8 630 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 SPOCD1Q6ZMY3 1216 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 SLC22A8Q8TCC7 542 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 MAGEC3Q8TD91 643 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 C9orf16Q9BUW7 83 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 ACAT2Q9BWD1 397 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 OSBPL11Q9BXB4 747 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 IFT46Q9NQC8 304 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 DNAJC11Q9NVH1 559 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 SSR3Q9UNL2 185 aa12.47□□□□□ -0.41
SMU1-201ENST00000397149 E2F3O00716 465 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 OR1I1O60431 355 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 TOB2Q14106 344 aaPredicted RBP12.46□□□□□ -0.41
SMU1-201ENST00000397149 LRP8Q14114 963 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 ADHFE1Q8IWW8 467 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 UBE2J2Q8N2K1 259 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 SRBD1Q8N5C6 995 aaKnown RBP12.46□□□□□ -0.41
SMU1-201ENST00000397149 CLHC1Q8NHS4 586 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 DNAJB14Q8TBM8 379 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 TIPINQ9BVW5 301 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 TDRD1Q9BXT4 1180 aaKnown RBP12.46□□□□□ -0.41
SMU1-201ENST00000397149 ZNF780BQ9Y6R6 833 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 ITSN2Q9NZM3 1697 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 MLH3Q9UHC1 1453 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 METTL18O95568 372 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 RPL19P84098 196 aaKnown RBP12.46□□□□□ -0.41
SMU1-201ENST00000397149 IRF8Q02556 426 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 PTPAQ15257 358 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 MEA1Q16626 185 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 PFKFB4Q16877 469 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 RGS21Q2M5E4 152 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 SLC45A4Q5BKX6 768 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 CASKIN2Q8WXE0 1202 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 PIGBQ92521 554 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 B3GALT6Q96L58 329 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 PHF20Q9BVI0 1012 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 GPRC5CQ9NQ84 441 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 SETD1BQ9UPS6 1966 aaKnown RBP12.46□□□□□ -0.41
SMU1-201ENST00000397149 RIPK2O43353 540 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 IL1BP01584 269 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 ZNF286BP0CG31 522 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 RIPK1Q13546 671 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 PEX5LQ8IYB4 626 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 HPS1Q92902 700 aa12.46□□□□□ -0.41
SMU1-201ENST00000397149 TRIM43Q96BQ3 446 aaPredicted RBP12.46□□□□□ -0.41
SMU1-201ENST00000397149 A0A1W2PQC6 194 aa12.46□□□□□ -0.42
SMU1-201ENST00000397149 FAM86B1E9PN63 330 aa12.46□□□□□ -0.42
SMU1-201ENST00000397149 SCGB1D2O95969 90 aa12.46□□□□□ -0.42
SMU1-201ENST00000397149 MBTD1Q05BQ5 628 aa12.46□□□□□ -0.42
SMU1-201ENST00000397149 PREPLQ4J6C6 727 aaPredicted RBP12.46□□□□□ -0.42
SMU1-201ENST00000397149 FRRS1Q6ZNA5 592 aa12.46□□□□□ -0.42
SMU1-201ENST00000397149 ZNF227Q86WZ6 799 aa12.46□□□□□ -0.42
SMU1-201ENST00000397149 RNF19AQ9NV58 838 aa12.46□□□□□ -0.42
SMU1-201ENST00000397149 HPF1Q9NWY4 346 aa12.46□□□□□ -0.42
SMU1-201ENST00000397149 IGSF9BQ9UPX0 1349 aa12.46□□□□□ -0.42
SMU1-201ENST00000397149 AK9Q5TCS8 1911 aa12.46□□□□□ -0.42
SMU1-201ENST00000397149 SMAD9O15198 467 aaKnown RBP12.46□□□□□ -0.42
SMU1-201ENST00000397149 RPS6KA4O75676 772 aa12.46□□□□□ -0.42
SMU1-201ENST00000397149 CCNDBP1O95273 360 aa12.46□□□□□ -0.42
SMU1-201ENST00000397149 MYBL2P10244 700 aa12.46□□□□□ -0.42
SMU1-201ENST00000397149 ECHS1P30084 290 aa12.46□□□□□ -0.42
SMU1-201ENST00000397149 FAM187BQ17R55 369 aa12.46□□□□□ -0.42
SMU1-201ENST00000397149 RETSATQ6NUM9 610 aa12.46□□□□□ -0.42
SMU1-201ENST00000397149 ZYG11AQ6WRX3 759 aa12.46□□□□□ -0.42
SMU1-201ENST00000397149 TNFAIP8L1Q8WVP5 186 aa12.46□□□□□ -0.42
SMU1-201ENST00000397149 ELAC1Q9H777 363 aaKnown RBP12.46□□□□□ -0.42
SMU1-201ENST00000397149 PALLDQ8WX93 1383 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 FAM205CA6NFA0 338 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 UBE2Q2LH0YL09 131 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 XKRYO14609 159 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 AVILO75366 819 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 UBOX5O94941 541 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 ASMTP46597 345 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 TXNDC11Q6PKC3 985 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 FOXRED2Q8IWF2 684 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 ASB12Q8WXK4 309 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 ISCUQ9H1K1 167 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 CTTNBP2Q8WZ74 1663 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms