RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 POU6F1Q14863 301 aa15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 DDR2Q16832 855 aa15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 DNAL1Q4LDG9 190 aa15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 ACSBG2Q5FVE4 666 aa15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 ESRP1Q6NXG1 681 aaKnown RBP15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 NAPRTQ6XQN6 538 aa15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 PPHLN1Q8NEY8 458 aaKnown RBP15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 FBXO27Q8NI29 283 aa15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 HHIPL1Q96JK4 782 aa15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 PRDM5Q9NQX1 630 aaPredicted RBP15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 TREX1Q9NSU2 369 aa15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 TLK1Q9UKI8 766 aa15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 LRRC42Q9Y546 428 aa15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 HTTP42858 3142 aa15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 NEBLO76041 1014 aa15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 CPA2P48052 419 aa15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 PRKAA2P54646 552 aa15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 KDSRQ06136 332 aa15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 UBAP2LQ14157 1087 aaKnown RBP15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 MRPL58Q14197 206 aaKnown RBP15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 SLC25A51Q9H1U9 297 aa15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 PCDHB5Q9Y5E4 795 aa15.55■□□□□ 0.08
UBE2D3-207ENST00000394801 MOXD2PA6NHM9 499 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 TM7SF2O76062 418 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 VAPBO95292 243 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 SLC35E2BP0CK96 405 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 COL6A1P12109 1028 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 RHOQP17081 205 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 TBX4P57082 545 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 RCN2Q14257 317 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 USP10Q14694 798 aaKnown RBP15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 KPNB1Q14974 876 aaKnown RBP15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 VARS2Q5ST30 1063 aaKnown RBP15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 WDR60Q8WVS4 1066 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 GLT1D1Q96MS3 346 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 PRKD2Q9BZL6 878 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 CDH19Q9H159 772 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 TRPV6Q9H1D0 765 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 TMEM248Q9NWD8 314 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 DNAJB4Q9UDY4 337 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 IGLV3-10A0A075B6K4 115 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 TARM1B6A8C7 271 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 F8W8V4 182 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 SBK3P0C264 359 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 CPOXP36551 454 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 GPR15P49685 360 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 RENBPP51606 427 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 USP46P62068 366 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 SLC12A1Q13621 1099 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 SDHAF4Q5VUM1 108 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 KIAA0930Q6ICG6 404 aaPredicted RBP15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 KDELC1Q6UW63 502 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 EPGNQ6UW88 154 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 SLC43A3Q8NBI5 491 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 GATA5Q9BWX5 397 aaPredicted RBP15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 ACE2Q9BYF1 805 aaPredicted RBP15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 UBE2OQ9C0C9 1292 aaKnown RBP15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 ATP13A1Q9HD20 1204 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 CLIC5Q9NZA1 410 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 BPTFQ12830 3046 aa15.54■□□□□ 0.08
UBE2D3-207ENST00000394801 PMPCBO75439 489 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 TADA2AO75478 443 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 GRK4P32298 578 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 TNK2Q07912 1038 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 MS4A13Q5J8X5 152 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 ZYG11AQ6WRX3 759 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 RAPH1Q70E73 1250 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 ZNF781Q8N8C0 355 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 C2CD4AQ8NCU7 369 aaPredicted RBP15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 IMP4Q96G21 291 aaKnown RBP15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 ZNF570Q96NI8 536 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 FSD1LQ9BXM9 530 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 FTHL17Q9BXU8 183 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 ZYG11BQ9C0D3 744 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.53■□□□□ 0.088e-9■■□□□ 13.6
UBE2D3-207ENST00000394801 ABT1Q9ULW3 272 aaKnown RBP15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 PRG3Q9Y2Y8 225 aaPredicted RBP15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 DOCK4Q8N1I0 1966 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 CCDC78A2IDD5 438 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 HSPA4LO95757 839 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 PAMP19021 973 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 PTDSS1P48651 473 aaKnown RBP15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 WNT3AP56704 352 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 SATB1Q01826 763 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 SP3Q02447 781 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 CNGA3Q16281 694 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 LIPMQ5VYY2 423 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 METTL21CQ5VZV1 264 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 DENND6AQ8IWF6 608 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 SCUBE1Q8IWY4 988 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 CENPLQ8N0S6 344 aaPredicted RBP15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 STYXQ8WUJ0 223 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 FAM193BQ96PV7 902 aaPredicted RBP15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 TSEN34Q9BSV6 310 aaKnown RBP15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 DRC3Q9H069 523 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 TASP1Q9H6P5 420 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 COG4Q9H9E3 785 aa15.53■□□□□ 0.08
UBE2D3-207ENST00000394801 VPS45Q9NRW7 570 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms