RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 ATP4AP20648 1035 aa9.23□□□□□ -0.93
CDH11-202ENST00000394156 CHRNA4P43681 627 aa9.23□□□□□ -0.93
CDH11-202ENST00000394156 SERPINB4P48594 390 aa9.23□□□□□ -0.93
CDH11-202ENST00000394156 NECAB2Q7Z6G3 386 aa9.23□□□□□ -0.93
CDH11-202ENST00000394156 SETD3Q86TU7 594 aaPredicted RBP9.23□□□□□ -0.93
CDH11-202ENST00000394156 DBF4BQ8NFT6 615 aa9.23□□□□□ -0.93
CDH11-202ENST00000394156 POLR1EQ9GZS1 481 aaKnown RBP9.23□□□□□ -0.93
CDH11-202ENST00000394156 EXOSC4Q9NPD3 245 aaKnown RBP9.23□□□□□ -0.93
CDH11-202ENST00000394156 USE1Q9NZ43 259 aa9.23□□□□□ -0.93
CDH11-202ENST00000394156 MKL2Q9ULH7 1088 aa9.23□□□□□ -0.93
CDH11-202ENST00000394156 EIF3LQ9Y262 564 aaKnown RBP9.23□□□□□ -0.93
CDH11-202ENST00000394156 TIMM44O43615 452 aa9.23□□□□□ -0.93
CDH11-202ENST00000394156 EPHA3P29320 983 aa9.23□□□□□ -0.93
CDH11-202ENST00000394156 GRIA4P48058 902 aa9.23□□□□□ -0.93
CDH11-202ENST00000394156 CRYMQ14894 314 aa9.23□□□□□ -0.93
CDH11-202ENST00000394156 SPANXN3Q5MJ09 141 aa9.23□□□□□ -0.93
CDH11-202ENST00000394156 PSRC1Q6PGN9 363 aaPredicted RBP9.23□□□□□ -0.93
CDH11-202ENST00000394156 ZNF621Q6ZSS3 439 aa9.23□□□□□ -0.93
CDH11-202ENST00000394156 HFE2Q6ZVN8 426 aa9.23□□□□□ -0.93
CDH11-202ENST00000394156 PCYOX1LQ8NBM8 494 aa9.23□□□□□ -0.93
CDH11-202ENST00000394156 ELOVL6Q9H5J4 265 aa9.23□□□□□ -0.93
CDH11-202ENST00000394156 NMRAL1Q9HBL8 299 aa9.23□□□□□ -0.93
CDH11-202ENST00000394156 DYRK1BQ9Y463 629 aa9.23□□□□□ -0.93
CDH11-202ENST00000394156 MTSS1O43312 755 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 TBC1D4O60343 1298 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 ASPAP45381 313 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 NAGLUP54802 743 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 NCALDP61601 193 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 PRKG2Q13237 762 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 TOMM20Q15388 145 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 MAPRE2Q15555 327 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 SYPL2Q5VXT5 272 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 SERPINA13PQ6UXR4 307 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 MON1BQ7L1V2 547 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 FAM228AQ86W67 206 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 SNX32Q86XE0 403 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 CLPTM1LQ96KA5 538 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 CPNE1Q99829 537 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 NSMCE4AQ9NXX6 385 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 GRM5P41594 1212 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 NR2C2P49116 596 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 NOGQ13253 232 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 KPNB1Q14974 876 aaKnown RBP9.22□□□□□ -0.93
CDH11-202ENST00000394156 TJAP1Q5JTD0 557 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 RPS27LQ71UM5 84 aaKnown RBP9.22□□□□□ -0.93
CDH11-202ENST00000394156 SLC9A9Q8IVB4 645 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 MIEF1Q9NQG6 463 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 PPIEQ9UNP9 301 aaKnown RBP9.22□□□□□ -0.93
CDH11-202ENST00000394156 PTPRJQ12913 1337 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 CCDC154A6NI56 674 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 E9PAM4 449 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 F8W810 466 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 GKP32189 559 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 MC4RP32245 332 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 GRIA1P42261 906 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 TMC5Q6UXY8 1006 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 LENG9Q96B70 501 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 CCDC3Q9BQI4 270 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 COPS7BQ9H9Q2 264 aaPredicted RBP9.22□□□□□ -0.93
CDH11-202ENST00000394156 KLF15Q9UIH9 416 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 DDX60Q8IY21 1712 aaKnown RBP9.22□□□□□ -0.93
CDH11-202ENST00000394156 CES2O00748 559 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 H2AFYO75367 372 aaKnown RBP9.22□□□□□ -0.93
CDH11-202ENST00000394156 IGSF6O95976 241 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 PSMD8P48556 350 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 POLD2P49005 469 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 LILRA4P59901 499 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 DCLRE1AQ6PJP8 1040 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 ANKRD23Q86SG2 305 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 RIBC1Q8N443 379 aaPredicted RBP9.22□□□□□ -0.93
CDH11-202ENST00000394156 METTL6Q8TCB7 284 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 RUBCNQ92622 972 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 MOCOSQ96EN8 888 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 TWNKQ96RR1 684 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 PAAF1Q9BRP4 392 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 MLPHQ9BV36 600 aaPredicted RBP9.22□□□□□ -0.93
CDH11-202ENST00000394156 EGFL7Q9UHF1 273 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 A0A0A0MRY4 1105 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 FAM237AA0A1B0GTK4 181 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 FCHO1O14526 889 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 ITPKAP23677 461 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 NMBRP28336 390 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 PBX1P40424 430 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 HIST2H2ACQ16777 129 aaPredicted RBP9.22□□□□□ -0.93
CDH11-202ENST00000394156 FAM110CQ1W6H9 321 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 DCAF12L1Q5VU92 463 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 HIST2H2AA3Q6FI13 130 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 SLC39A4Q6P5W5 647 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 CHPFQ8IZ52 775 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 APOPT1Q96IL0 206 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 SPATA13Q96N96 652 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 MFSD1Q9H3U5 465 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 LRRC10BA6NIK2 292 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 YJEFN3A6XGL0 299 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 E7ENQ6 273 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 C1RP00736 705 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 HOXD13P35453 343 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 CORO7P57737 925 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 VAC14Q08AM6 782 aa9.22□□□□□ -0.93
CDH11-202ENST00000394156 ZIK1Q3SY52 487 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms