RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.56□□□□□ -0.56
LAMB1-203ENST00000393560 DCAF8L1A6NGE4 600 aa11.56□□□□□ -0.56
LAMB1-203ENST00000393560 GSG1L2A8MUP6 293 aa11.56□□□□□ -0.56
LAMB1-203ENST00000393560 KCNK2O95069 426 aa11.56□□□□□ -0.56
LAMB1-203ENST00000393560 EEF1GP26641 437 aaKnown RBP11.56□□□□□ -0.56
LAMB1-203ENST00000393560 PTGDRQ13258 359 aa11.56□□□□□ -0.56
LAMB1-203ENST00000393560 PMS2P3Q13401 168 aa11.56□□□□□ -0.56
LAMB1-203ENST00000393560 KYAT1Q16773 422 aa11.56□□□□□ -0.56
LAMB1-203ENST00000393560 UGP2Q16851 508 aa11.56□□□□□ -0.56
LAMB1-203ENST00000393560 YIF1BQ5BJH7 314 aa11.56□□□□□ -0.56
LAMB1-203ENST00000393560 CCDC103Q8IW40 242 aa11.56□□□□□ -0.56
LAMB1-203ENST00000393560 TRIM22Q8IYM9 498 aa11.56□□□□□ -0.56
LAMB1-203ENST00000393560 ADGRG2Q8IZP9 1017 aa11.56□□□□□ -0.56
LAMB1-203ENST00000393560 EFCAB3Q8N7B9 438 aa11.56□□□□□ -0.56
LAMB1-203ENST00000393560 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.56□□□□□ -0.56
LAMB1-203ENST00000393560 PIK3C3Q8NEB9 887 aa11.56□□□□□ -0.56
LAMB1-203ENST00000393560 ABHD11Q8NFV4 315 aa11.56□□□□□ -0.56
LAMB1-203ENST00000393560 OR52N1Q8NH53 320 aa11.56□□□□□ -0.56
LAMB1-203ENST00000393560 RANBP3Q9H6Z4 567 aaPredicted RBP11.56□□□□□ -0.56
LAMB1-203ENST00000393560 CPNE5Q9HCH3 593 aa11.56□□□□□ -0.56
LAMB1-203ENST00000393560 TCRBV5S4A2TA0A5A2 114 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 SLC12A8A0AV02 714 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 RNF103O00237 685 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 THAP12O43422 761 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 SPAG6O75602 509 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 MICAL2O94851 1124 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 SRCP12931 536 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 CCND2P30279 289 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 HNRNPH3P31942 346 aaKnown RBP11.55□□□□□ -0.56
LAMB1-203ENST00000393560 RPS8P62241 208 aaKnown RBP11.55□□□□□ -0.56
LAMB1-203ENST00000393560 RPP30P78346 268 aaKnown RBP11.55□□□□□ -0.56
LAMB1-203ENST00000393560 SLC25A3Q00325 362 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 PLIN5Q00G26 463 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 BNIP2Q12982 314 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 DMC1Q14565 340 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 TPCN2Q8NHX9 752 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 CNOT11Q9UKZ1 510 aaKnown RBP11.55□□□□□ -0.56
LAMB1-203ENST00000393560 A0A1W2PQJ5 194 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 TRIM75PA6NK02 468 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 AXIN1O15169 862 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 BRINP1O60477 761 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 CPNE3O75131 537 aaKnown RBP11.55□□□□□ -0.56
LAMB1-203ENST00000393560 ATG7O95352 703 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 FOXK2Q01167 660 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 NR1H3Q13133 447 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 NFIXQ14938 502 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 TMED2Q15363 201 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 TCHHL1Q5QJ38 904 aaPredicted RBP11.55□□□□□ -0.56
LAMB1-203ENST00000393560 SHQ1Q6PI26 577 aaKnown RBP11.55□□□□□ -0.56
LAMB1-203ENST00000393560 ZER1Q7Z7L7 766 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 ZNF654Q8IZM8 581 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 ZCCHC7Q8N3Z6 543 aaKnown RBP11.55□□□□□ -0.56
LAMB1-203ENST00000393560 OR6F1Q8NGZ6 308 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 JADE3Q92613 823 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 OXNAD1Q96HP4 312 aaPredicted RBP11.55□□□□□ -0.56
LAMB1-203ENST00000393560 FAM126AQ9BYI3 521 aaPredicted RBP11.55□□□□□ -0.56
LAMB1-203ENST00000393560 EDEM3Q9BZQ6 932 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 WDR12Q9GZL7 423 aaKnown RBP11.55□□□□□ -0.56
LAMB1-203ENST00000393560 OLAHQ9NV23 265 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 PKD2L1Q9P0L9 805 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 IPPQ9Y573 584 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 C4AP0C0L4 1744 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 C4BP0C0L5 1744 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 A0A087WXM4 84 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 SLC9B1P1A6NJY1 282 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 GATCO43716 136 aaKnown RBP11.55□□□□□ -0.56
LAMB1-203ENST00000393560 GMDSO60547 372 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 LILRB3O75022 631 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 APOC1P02654 83 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 LTA4HP09960 611 aaKnown RBP11.55□□□□□ -0.56
LAMB1-203ENST00000393560 EDN3P14138 238 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 KCNA5P22460 613 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 ARL4CP56559 192 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 ABCE1P61221 599 aaKnown RBP11.55□□□□□ -0.56
LAMB1-203ENST00000393560 BTN1A1Q13410 526 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 RAB39AQ14964 217 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 SLC1A5Q15758 541 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 PDSS1Q5T2R2 415 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 P3H2Q8IVL5 708 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 CHERPQ8IWX8 916 aaKnown RBP11.55□□□□□ -0.56
LAMB1-203ENST00000393560 WDR48Q8TAF3 677 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 MARVELD3Q96A59 401 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 SIPA1Q96FS4 1042 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 KLHL32Q96NJ5 620 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 KANSL2Q9H9L4 492 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 ARNT2Q9HBZ2 717 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 NGRNQ9NPE2 291 aaKnown RBP11.55□□□□□ -0.56
LAMB1-203ENST00000393560 POLE3Q9NRF9 147 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 TBC1D22BQ9NU19 505 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 EIF3KQ9UBQ5 218 aaKnown RBP11.55□□□□□ -0.56
LAMB1-203ENST00000393560 COPS3Q9UNS2 423 aa11.55□□□□□ -0.56
LAMB1-203ENST00000393560 ZMYM2Q9UBW7 1377 aa11.54□□□□□ -0.56
LAMB1-203ENST00000393560 POM121CA8CG34 1229 aa11.54□□□□□ -0.56
LAMB1-203ENST00000393560 PODXLO00592 558 aa11.54□□□□□ -0.56
LAMB1-203ENST00000393560 MAOBP27338 520 aa11.54□□□□□ -0.56
LAMB1-203ENST00000393560 GPC1P35052 558 aa11.54□□□□□ -0.56
LAMB1-203ENST00000393560 RPA3P35244 121 aaPredicted RBP11.54□□□□□ -0.56
LAMB1-203ENST00000393560 GRIK1P39086 918 aa11.54□□□□□ -0.56
LAMB1-203ENST00000393560 ERVFC1P60507 584 aa11.54□□□□□ -0.56
LAMB1-203ENST00000393560 KRT17Q04695 432 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms