RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 OR2AP1Q8NGE2 309 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 C1orf216Q8TAB5 229 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 SKA1Q96BD8 255 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 RNF25Q96BH1 459 aaPredicted RBP12.9□□□□□ -0.34
GGPS1-203ENST00000391855 HMCESQ96FZ2 354 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 GDAP1L1Q96MZ0 367 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 OSBPL1AQ9BXW6 950 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 TNKS2Q9H2K2 1166 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 LRRC19Q9H756 370 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 NHEJ1Q9H9Q4 299 aaPredicted RBP12.9□□□□□ -0.34
GGPS1-203ENST00000391855 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.9□□□□□ -0.34
GGPS1-203ENST00000391855 RCOR3Q9P2K3 495 aaPredicted RBP12.9□□□□□ -0.34
GGPS1-203ENST00000391855 SARDHQ9UL12 918 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 INTUQ9ULD6 942 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 FCF1Q9Y324 198 aaKnown RBP12.9□□□□□ -0.34
GGPS1-203ENST00000391855 WASF2Q9Y6W5 498 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 CEP250Q9BV73 2442 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 C4orf47A7E2U8 309 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 CDX4O14627 284 aaPredicted RBP12.89□□□□□ -0.35
GGPS1-203ENST00000391855 OPHN1O60890 802 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 PROSCO94903 275 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 CER1O95813 267 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 IGSF6O95976 241 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 IGHV4-34P06331 123 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 CTSLP07711 333 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 ERCC2P18074 760 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 ITGB7P26010 798 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 IL1R2P27930 398 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 MAN1A1P33908 653 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 SERPINB6P35237 376 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 DNA2P51530 1060 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 NEK3P51956 506 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 RACK1P63244 317 aaKnown RBP12.89□□□□□ -0.35
GGPS1-203ENST00000391855 SLC25A11Q02978 314 aaKnown RBP12.89□□□□□ -0.35
GGPS1-203ENST00000391855 PDAP1Q13442 181 aaKnown RBP12.89□□□□□ -0.35
GGPS1-203ENST00000391855 DPYSQ14117 519 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 PRPF39Q86UA1 669 aaKnown RBP12.89□□□□□ -0.35
GGPS1-203ENST00000391855 TRIM69Q86WT6 500 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 RHOT2Q8IXI1 618 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 MINDY1Q8N5J2 469 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 CHST14Q8NCH0 376 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 GRIN3AQ8TCU5 1115 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 GTPBP2Q9BX10 602 aaKnown RBP12.89□□□□□ -0.35
GGPS1-203ENST00000391855 HDAC8Q9BY41 377 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 TM6SF2Q9BZW4 377 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 UBA2Q9UBT2 640 aaPredicted RBP12.89□□□□□ -0.35
GGPS1-203ENST00000391855 DMTF1Q9Y222 760 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 PI4KAP42356 2102 aa12.89□□□□□ -0.35
GGPS1-203ENST00000391855 TBC1D3DA0A087WVF3 549 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 TBC1D3IA0A087WXS9 549 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 TBC1D3EA0A087X179 549 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 TBC1D3KA0A087X1G2 549 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 TBC1D3FA6NER0 549 aaPredicted RBP12.88□□□□□ -0.35
GGPS1-203ENST00000391855 UPK3BL1B0FP48 263 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 TBC1D3LB9A6J9 549 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 UPK3BL2E5RIL1 263 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 TM4SF5O14894 197 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 LATO43561 262 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 PRAMEF11O60813 436 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 LEFTY1O75610 366 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 TMCC1O94876 653 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 POP4O95707 220 aaKnown RBP12.88□□□□□ -0.35
GGPS1-203ENST00000391855 TBC1D3HP0C7X1 549 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 RARAP10276 462 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 MAPK8P45983 427 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 ZNF75DP51815 510 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 RHOAP61586 193 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 GRIK2Q13002 908 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 SLC14A1Q13336 389 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 GRM3Q14832 879 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 SMTNL2Q2TAL5 461 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 SLC45A4Q5BKX6 768 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 ARSIQ5FYB1 569 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 KCNT1Q5JUK3 1230 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 PIP5KL1Q5T9C9 394 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 AFMIDQ63HM1 303 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 TBC1D3GQ6DHY5 549 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 TBC1D3CQ6IPX1 549 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 TMCO3Q6UWJ1 677 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 ERN2Q76MJ5 926 aaKnown RBP12.88□□□□□ -0.35
GGPS1-203ENST00000391855 POLNQ7Z5Q5 900 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 TBC1D3Q8IZP1 549 aaPredicted RBP12.88□□□□□ -0.35
GGPS1-203ENST00000391855 RYBPQ8N488 228 aaPredicted RBP12.88□□□□□ -0.35
GGPS1-203ENST00000391855 RFFLQ8WZ73 363 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 HSPH1Q92598 858 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 RAB7BQ96AH8 199 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 ARRDC3Q96B67 414 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 CHP1Q99653 195 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 ORAI3Q9BRQ5 295 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 RBSNQ9H1K0 784 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 SP110Q9HB58 689 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 PDFQ9HBH1 243 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 TM9SF3Q9HD45 589 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 LUC7LQ9NQ29 371 aaKnown RBP12.88□□□□□ -0.35
GGPS1-203ENST00000391855 DNAAF2Q9NVR5 837 aaKnown RBP12.88□□□□□ -0.35
GGPS1-203ENST00000391855 CWC15Q9P013 229 aaKnown RBP12.88□□□□□ -0.35
GGPS1-203ENST00000391855 CFAP54Q96N23 3096 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 NUMA1Q14980 2115 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 DCDC2BA2VCK2 349 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 MTA2O94776 668 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms