RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 SIRPGQ9P1W8 387 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 GULP1Q9UBP9 304 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 GGT7Q9UJ14 662 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 SALL4Q9UJQ4 1053 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 SNX10Q9Y5X0 201 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 HS3ST3A1Q9Y663 406 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 CSNK1G3Q9Y6M4 447 aa12.06□□□□□ -0.48
SOD1-202ENST00000389995 PRRC2CQ9Y520 2896 aaKnown RBP12.06□□□□□ -0.48
SOD1-202ENST00000389995 IGLON5A6NGN9 336 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 E5RJQ4 531 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 CETN3O15182 167 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 LEFTY1O75610 366 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 ITGB2P05107 769 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 ITIH1P19827 911 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 TBXAS1P24557 533 aaPredicted RBP12.05□□□□□ -0.48
SOD1-202ENST00000389995 GPD2P43304 727 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 CCL7P80098 99 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 EIF4EBP2Q13542 120 aaPredicted RBP12.05□□□□□ -0.48
SOD1-202ENST00000389995 PKP1Q13835 747 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 IGFBP7Q16270 282 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 SKIDA1Q1XH10 827 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 DPY19L3Q6ZPD9 716 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 RRAGAQ7L523 313 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 ZFAND4Q86XD8 727 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 DCP2Q8IU60 420 aaKnown RBP12.05□□□□□ -0.48
SOD1-202ENST00000389995 PPM1KQ8N3J5 372 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 TPCN2Q8NHX9 752 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 HTR3CQ8WXA8 447 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 KLF6Q99612 283 aaPredicted RBP12.05□□□□□ -0.48
SOD1-202ENST00000389995 LRRC61Q9BV99 259 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 HDAC8Q9BY41 377 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 CLPBQ9H078 707 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.05□□□□□ -0.48
SOD1-202ENST00000389995 DDIT4Q9NX09 232 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 NCKIPSDQ9NZQ3 722 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 PISDQ9UG56 409 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 APOBEC3BQ9UH17 382 aaKnown RBP12.05□□□□□ -0.48
SOD1-202ENST00000389995 IL36AQ9UHA7 158 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 VPS51Q9UID3 782 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 PADI4Q9UM07 663 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 HS3ST2Q9Y278 367 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 ITM2BQ9Y287 266 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 FARP1Q9Y4F1 1045 aaPredicted RBP12.05□□□□□ -0.48
SOD1-202ENST00000389995 PCDHGA4Q9Y5G9 962 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 HS3ST4Q9Y661 456 aa12.05□□□□□ -0.48
SOD1-202ENST00000389995 RP1L1Q8IWN7 2480 aaPredicted RBP12.04□□□□□ -0.48
SOD1-202ENST00000389995 PRAMEF33A0A0G2JMD5 474 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 NTN3O00634 580 aaPredicted RBP12.04□□□□□ -0.48
SOD1-202ENST00000389995 FPGTO14772 594 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 YY2O15391 372 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 PRAMEF10O60809 474 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 GRAP2O75791 330 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 F13A1P00488 732 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 PRNPP04156 253 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 NTRK1P04629 796 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 ZSCAN22P10073 491 aaPredicted RBP12.04□□□□□ -0.48
SOD1-202ENST00000389995 ADRB3P13945 408 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 RABIFP47224 123 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 RPL34P49207 117 aaKnown RBP12.04□□□□□ -0.48
SOD1-202ENST00000389995 NDUFA8P51970 172 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 YWHAZP63104 245 aaKnown RBP12.04□□□□□ -0.48
SOD1-202ENST00000389995 RPS21P63220 83 aaKnown RBP12.04□□□□□ -0.48
SOD1-202ENST00000389995 EDRF1Q3B7T1 1238 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 ALFQ53S48 1182 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 MANEAQ5SRI9 462 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 TTC39BQ5VTQ0 682 aaPredicted RBP12.04□□□□□ -0.48
SOD1-202ENST00000389995 HIST2H2BCQ6DN03 193 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 NYAP1Q6ZVC0 841 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 ARHGEF19Q8IW93 802 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 DEFB106AQ8N104 65 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 SDR16C5Q8N3Y7 309 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 JPH3Q8WXH2 748 aaPredicted RBP12.04□□□□□ -0.48
SOD1-202ENST00000389995 SLC35C1Q96A29 364 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 CCDC47Q96A33 483 aaKnown RBP12.04□□□□□ -0.48
SOD1-202ENST00000389995 CCDC74AQ96AQ1 378 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 LIN37Q96GY3 246 aaPredicted RBP12.04□□□□□ -0.48
SOD1-202ENST00000389995 SIK2Q9H0K1 926 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 POPDC2Q9HBU9 364 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 SPASTQ9UBP0 616 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 SLC12A6Q9UHW9 1150 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 RCOR1Q9UKL0 485 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 HPSEQ9Y251 543 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 PCDHGA7Q9Y5G6 932 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 FADS3Q9Y5Q0 445 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 ACTL7AQ9Y615 435 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 WASF2Q9Y6W5 498 aa12.04□□□□□ -0.48
SOD1-202ENST00000389995 LRBAP50851 2863 aa12.03□□□□□ -0.48
SOD1-202ENST00000389995 A0A0D9SEW6 157 aa12.03□□□□□ -0.48
SOD1-202ENST00000389995 A0A1W2PQM1 296 aa12.03□□□□□ -0.48
SOD1-202ENST00000389995 TPP1O14773 563 aa12.03□□□□□ -0.48
SOD1-202ENST00000389995 ZNF821O75541 412 aaPredicted RBP12.03□□□□□ -0.48
SOD1-202ENST00000389995 MYL1P05976 194 aa12.03□□□□□ -0.48
SOD1-202ENST00000389995 ANXA6P08133 673 aa12.03□□□□□ -0.48
SOD1-202ENST00000389995 LIPCP11150 499 aa12.03□□□□□ -0.48
SOD1-202ENST00000389995 GP1BBP13224 206 aa12.03□□□□□ -0.48
SOD1-202ENST00000389995 TSHRP16473 764 aa12.03□□□□□ -0.48
SOD1-202ENST00000389995 CMA1P23946 247 aa12.03□□□□□ -0.48
SOD1-202ENST00000389995 GKP32189 559 aa12.03□□□□□ -0.48
SOD1-202ENST00000389995 ETV5P41161 510 aa12.03□□□□□ -0.48
SOD1-202ENST00000389995 MLLT3P42568 568 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms