RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 CILPO75339 1184 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 TADA2AO75478 443 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 KCNJ11Q14654 390 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 NR6A1Q15406 480 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 DCAF4L1Q3SXM0 396 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 ZRANB3Q5FWF4 1079 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 EGFLAMQ63HQ2 1017 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 SLC9A4Q6AI14 798 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 SPATA2LQ8IUW3 424 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 SFRP1Q8N474 314 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 BPIFB6Q8NFQ5 453 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 COPS5Q92905 334 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 NXNL1Q96CM4 212 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 OSBPL6Q9BZF3 934 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 ULBP1Q9BZM6 244 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 HMG20AQ9NP66 347 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 OLA1Q9NTK5 396 aaKnown RBP13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 PTPRJQ12913 1337 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 SPATA31C2B4DYI2 1134 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 LTFP02788 710 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 OR52E8Q6IFG1 317 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 FASTKD5Q7L8L6 764 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 EFL1Q7Z2Z2 1120 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 FAM126BQ8IXS8 530 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 CENPLQ8N0S6 344 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 FBXO30Q8TB52 745 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 RORBQ92753 470 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 PKP2Q99959 881 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 TBCDQ9BTW9 1192 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 C1orf21Q9H246 121 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 RAD21L1Q9H4I0 556 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 SEMA4BQ9NPR2 832 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 RBMX2Q9Y388 322 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 FARP1Q9Y4F1 1045 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 SYNCRIPO60506 623 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 H6PDO95479 791 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 ZNF682O95780 498 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 SLC25A11Q02978 314 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 MSLNQ13421 630 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 DPYSQ14117 519 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 IL23RQ5VWK5 629 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 TFAP2DQ7Z6R9 452 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 NIPA2Q8N8Q9 360 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 ITFG1Q8TB96 612 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 WNT8BQ93098 351 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 MAGED4Q96JG8 741 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 BBS2Q9BXC9 721 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 ROGDIQ9GZN7 287 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 TKTL2Q9H0I9 626 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 HMGXB4Q9UGU5 601 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 TNFSF13BQ9Y275 285 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 A0A088AWK7 358 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 TNPO2O14787 897 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 RFPL1O75677 317 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 LIMK2P53671 638 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 IRF9Q00978 393 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 SPIDRQ14159 915 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 ZNF484Q5JVG2 852 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 TMEM63BQ5T3F8 832 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 ABI1Q8IZP0 508 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 TRPC4APQ8TEL6 797 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 ZFYVE28Q9HCC9 887 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 SIRPGQ9P1W8 387 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 OR12D3Q9UGF7 316 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 NWD2Q9ULI1 1742 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 USP17L7P0C7H9 530 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 CCDC159P0C7I6 412 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 TGFB3P10600 412 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 MLNP12872 115 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 PCSK1P29120 753 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 PPM1FP49593 454 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 UBE3AQ05086 875 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 RAD51Q06609 339 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 TRIM25Q14258 630 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 ZNF460Q14592 562 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 PCID2Q5JVF3 399 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 ILDR2Q71H61 639 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 FBXO39Q8N4B4 442 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 PPP1R13LQ8WUF5 828 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 MRPL45Q9BRJ2 306 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 TRIM62Q9BVG3 475 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 C6orf62Q9GZU0 229 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 COMMD8Q9NX08 183 aa13.29□□□□□ -0.28
TRAPPC9-201ENST00000389328 SCN11AQ9UI33 1791 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 SETD1AO15047 1707 aaKnown RBP13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 SPTLC1O15269 473 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 ZBTB11O95625 1053 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 HGFP14210 728 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 NOS2P35228 1153 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 AHI1Q8N157 1196 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 PTGR2Q8N8N7 351 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 OR52K2Q8NGK3 314 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 PPP1R2P1Q96PQ5 205 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 KCTD15Q96SI1 283 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 MRPL57Q9BQC6 102 aaKnown RBP13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 NUDT5Q9UKK9 219 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 FBXO5Q9UKT4 447 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 KATNA1O75449 491 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 GCATO75600 419 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 GLP2RO95838 553 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms