RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 RTKNQ9BST9 563 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 TSEN34Q9BSV6 310 aaKnown RBP5.79□□□□□ -1.48
RFC1-202ENST00000381897 ASPSCR1Q9BZE9 553 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 KCNN2Q9H2S1 579 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 SRA1Q9HD15 236 aaKnown RBP5.79□□□□□ -1.48
RFC1-202ENST00000381897 COG5Q9UP83 839 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 CDYLQ9Y232 598 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 TMEM98Q9Y2Y6 226 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 STRAPQ9Y3F4 350 aaKnown RBP5.79□□□□□ -1.48
RFC1-202ENST00000381897 HNRNPCL3B7ZW38 293 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 M0R2N6 131 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 DFFAO00273 331 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 KLHL41O60662 606 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 ITGAVP06756 1048 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 HNRNPCL4P0DMR1 293 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 ME2P23368 584 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 HLA-FP30511 346 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 DPP6P42658 865 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 PSMD4P55036 377 aaKnown RBP5.79□□□□□ -1.48
RFC1-202ENST00000381897 KRT76Q01546 638 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.79□□□□□ -1.48
RFC1-202ENST00000381897 C19orf57Q0VDD7 668 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 NAB1Q13506 487 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 CUL2Q13617 745 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 NR1D2Q14995 579 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 C6orf132Q5T0Z8 1188 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 LRRC38Q5VT99 294 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 SUSD4Q5VX71 490 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 AFTPHQ6ULP2 937 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 SPOCD1Q6ZMY3 1216 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 KCNK18Q7Z418 384 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 ZNF34Q8IZ26 560 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 MCOLN2Q8IZK6 566 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 PIWIL2Q8TC59 973 aaKnown RBP5.79□□□□□ -1.48
RFC1-202ENST00000381897 S100ZQ8WXG8 99 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 AARSD1Q9BTE6 412 aaKnown RBP5.79□□□□□ -1.48
RFC1-202ENST00000381897 ZNF696Q9H7X3 374 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 MOV10Q9HCE1 1003 aaKnown RBP5.79□□□□□ -1.48
RFC1-202ENST00000381897 SIX2Q9NPC8 291 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 SLC9A2Q9UBY0 812 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 TUBGCP4Q9UGJ1 667 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 CDH22Q9UJ99 828 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 ZNF510Q9Y2H8 683 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 TELO2Q9Y4R8 837 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 ORC6Q9Y5N6 252 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 A0A1W2PPH5 198 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 TMEM247A6NEH6 219 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 CAPN8A6NHC0 703 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 PRRT4C9JH25 899 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 NPIPA5E9PKD4 350 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 NPIPA3F8WFD2 350 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 RAB27BO00194 218 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 DENRO43583 198 aaKnown RBP5.79□□□□□ -1.48
RFC1-202ENST00000381897 TRIM3O75382 744 aaPredicted RBP5.79□□□□□ -1.48
RFC1-202ENST00000381897 ARAFP10398 606 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 ENO3P13929 434 aaPredicted RBP5.79□□□□□ -1.48
RFC1-202ENST00000381897 PRKCEQ02156 737 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 NFE2L1Q14494 772 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 TCHHL1Q5QJ38 904 aaPredicted RBP5.79□□□□□ -1.48
RFC1-202ENST00000381897 NEK10Q6ZWH5 1172 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 REM2Q8IYK8 340 aaPredicted RBP5.79□□□□□ -1.48
RFC1-202ENST00000381897 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.79□□□□□ -1.48
RFC1-202ENST00000381897 BANPQ8N9N5 519 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 GLIS3Q8NEA6 775 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 HMGB4Q8WW32 186 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 SEPT1Q8WYJ6 367 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 PANX3Q96QZ0 392 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 SPATA9Q9BWV2 254 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 CPVLQ9H3G5 476 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 EXO5Q9H790 373 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 SMYD2Q9NRG4 433 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 ASNSD1Q9NWL6 643 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 SLC7A8Q9UHI5 535 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 CDV3Q9UKY7 258 aaKnown RBP5.79□□□□□ -1.48
RFC1-202ENST00000381897 NPIPA1Q9UND3 350 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 PCDHGB3Q9Y5G1 929 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 SNX8Q9Y5X2 465 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 MYH7P12883 1935 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 IGSF9BQ9UPX0 1349 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 CYTH3O43739 400 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 SRP72O76094 671 aaKnown RBP5.79□□□□□ -1.48
RFC1-202ENST00000381897 SLC1A6P48664 564 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 PRKAA2P54646 552 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 GDF10P55107 478 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 PRAMEP78395 509 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 SLC25A3Q00325 362 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 ZNF543Q08ER8 600 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 ZNF846Q147U1 533 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 DNAJC14Q6Y2X3 702 aaPredicted RBP5.79□□□□□ -1.48
RFC1-202ENST00000381897 FKBP9P1Q75LS8 142 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 DPY19L4Q7Z388 723 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 PRUNE1Q86TP1 453 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 CDAN1Q8IWY9 1227 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 COMMD1Q8N668 190 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 ZBTB34Q8NCN2 500 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 EMID1Q96A84 441 aaPredicted RBP5.79□□□□□ -1.48
RFC1-202ENST00000381897 TADA1Q96BN2 335 aa5.79□□□□□ -1.48
RFC1-202ENST00000381897 FAM84BQ96KN1 310 aaPredicted RBP5.79□□□□□ -1.48
RFC1-202ENST00000381897 RPRD1AQ96P16 312 aaPredicted RBP5.79□□□□□ -1.48
RFC1-202ENST00000381897 DCUN1D5Q9BTE7 237 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms