RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 OLFML1Q6UWY5 402 aa11.79□□□□□ -0.52
PITRM1-202ENST00000380989 C10orf107Q8IVU9 208 aa11.79□□□□□ -0.52
PITRM1-202ENST00000380989 ATAD1Q8NBU5 361 aa11.79□□□□□ -0.52
PITRM1-202ENST00000380989 ZNF398Q8TD17 642 aa11.79□□□□□ -0.52
PITRM1-202ENST00000380989 TRIM11Q96F44 468 aa11.79□□□□□ -0.52
PITRM1-202ENST00000380989 DCUN1D1Q96GG9 259 aa11.79□□□□□ -0.52
PITRM1-202ENST00000380989 VCPIP1Q96JH7 1222 aa11.79□□□□□ -0.52
PITRM1-202ENST00000380989 PLEKHG4BQ96PX9 1271 aa11.79□□□□□ -0.52
PITRM1-202ENST00000380989 VN1R3Q9BXE9 311 aa11.79□□□□□ -0.52
PITRM1-202ENST00000380989 ELAC1Q9H777 363 aaKnown RBP11.79□□□□□ -0.52
PITRM1-202ENST00000380989 GMPR2Q9P2T1 348 aaKnown RBP11.79□□□□□ -0.52
PITRM1-202ENST00000380989 TBC1D30Q9Y2I9 924 aa11.79□□□□□ -0.52
PITRM1-202ENST00000380989 SLC27A5Q9Y2P5 690 aa11.79□□□□□ -0.52
PITRM1-202ENST00000380989 DNAJA2O60884 412 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 GSRP00390 522 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 USP17L7P0C7H9 530 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 NPR3P17342 541 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 BCAT1P54687 386 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 CD300CQ08708 224 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 CASC4Q6P4E1 433 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 LRRC8BQ6P9F7 803 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 METTL23Q86XA0 190 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 RXFP2Q8WXD0 754 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 TOP1MTQ969P6 601 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 PRICKLE1Q96MT3 831 aaPredicted RBP11.78□□□□□ -0.52
PITRM1-202ENST00000380989 HNRNPABQ99729 332 aaKnown RBP11.78□□□□□ -0.52
PITRM1-202ENST00000380989 DUSP16Q9BY84 665 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 TMPRSS4Q9NRS4 437 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 KIAA1257Q9ULG3 409 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 SCINQ9Y6U3 715 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 MYO7AQ13402 2215 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 KDELR1P24390 212 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 DNAJB2P25686 324 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 SLC25A11Q02978 314 aaKnown RBP11.78□□□□□ -0.52
PITRM1-202ENST00000380989 SLC18A2Q05940 514 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 DLG2Q15700 870 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 INTS6LQ5JSJ4 861 aaKnown RBP11.78□□□□□ -0.52
PITRM1-202ENST00000380989 NKD2Q969F2 451 aaPredicted RBP11.78□□□□□ -0.52
PITRM1-202ENST00000380989 FAM149B1Q96BN6 582 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 SLC4A5Q9BY07 1137 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 WWP1Q9H0M0 922 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 CWH43Q9H720 699 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.78□□□□□ -0.52
PITRM1-202ENST00000380989 KCNK4Q9NYG8 393 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 COL4A6Q14031 1691 aa11.78□□□□□ -0.52
PITRM1-202ENST00000380989 GOLGA8TH3BQL2 631 aa11.77□□□□□ -0.52
PITRM1-202ENST00000380989 CRTAMO95727 393 aa11.77□□□□□ -0.52
PITRM1-202ENST00000380989 ALDH1A3P47895 512 aa11.77□□□□□ -0.52
PITRM1-202ENST00000380989 MS4A2Q01362 244 aa11.77□□□□□ -0.52
PITRM1-202ENST00000380989 DDR2Q16832 855 aa11.77□□□□□ -0.52
PITRM1-202ENST00000380989 SLC9B1Q4ZJI4 515 aa11.77□□□□□ -0.52
PITRM1-202ENST00000380989 N4BP2L1Q5TBK1 243 aaPredicted RBP11.77□□□□□ -0.52
PITRM1-202ENST00000380989 FUT10Q6P4F1 479 aa11.77□□□□□ -0.52
PITRM1-202ENST00000380989 UBE2Q1Q7Z7E8 422 aa11.77□□□□□ -0.52
PITRM1-202ENST00000380989 CAND1Q86VP6 1230 aaKnown RBP11.77□□□□□ -0.52
PITRM1-202ENST00000380989 ARHGAP24Q8N264 748 aa11.77□□□□□ -0.52
PITRM1-202ENST00000380989 TMEM86AQ8N2M4 240 aa11.77□□□□□ -0.52
PITRM1-202ENST00000380989 MCRS1Q96EZ8 462 aa11.77□□□□□ -0.52
PITRM1-202ENST00000380989 UROC1Q96N76 676 aa11.77□□□□□ -0.52
PITRM1-202ENST00000380989 OR52B2Q96RD2 323 aa11.77□□□□□ -0.52
PITRM1-202ENST00000380989 CRISPLD1Q9H336 500 aa11.77□□□□□ -0.52
PITRM1-202ENST00000380989 ARMC7Q9H6L4 198 aa11.77□□□□□ -0.52
PITRM1-202ENST00000380989 NUDT5Q9UKK9 219 aa11.77□□□□□ -0.52
PITRM1-202ENST00000380989 CDH9Q9ULB4 789 aa11.77□□□□□ -0.52
PITRM1-202ENST00000380989 DTNAQ9Y4J8 743 aa11.77□□□□□ -0.52
PITRM1-202ENST00000380989 F8W8V4 182 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 KIAA0355O15063 1070 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 STAMBPO95630 424 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 SRGAP2BP0DMP2 458 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 PDGFRAP16234 1089 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 XRCC1P18887 633 aaPredicted RBP11.77□□□□□ -0.53
PITRM1-202ENST00000380989 MIPP30301 263 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 GABRB2P47870 512 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 TKTL1P51854 596 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 COPAP53621 1224 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 LMNB2Q03252 620 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 ITGA9Q13797 1035 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 UNC5AQ6ZN44 842 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 TMEM110Q86TL2 294 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 CHSY1Q86X52 802 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 MAP7D3Q8IWC1 876 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 SCN4BQ8IWT1 228 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 TTC39CQ8N584 583 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 PNPLA1Q8N8W4 532 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 ICA1LQ8NDH6 482 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 EMCNQ9ULC0 261 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 AP4B1Q9Y6B7 739 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 METTL18O95568 372 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 JUNP05412 331 aaKnown RBP11.77□□□□□ -0.53
PITRM1-202ENST00000380989 SAT1P21673 171 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 FDFT1P37268 417 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 ALDH7A1P49419 539 aaKnown RBP11.77□□□□□ -0.53
PITRM1-202ENST00000380989 EMP3P54852 163 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 CDH6P55285 790 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 CNGA3Q16281 694 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 CA9Q16790 459 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 CTXN3Q4LDR2 81 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 ANKRD20A4Q4UJ75 823 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 SLC26A11Q86WA9 606 aa11.77□□□□□ -0.53
PITRM1-202ENST00000380989 PQLC3Q8N755 202 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms