RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 MAGEE2Q8TD90 523 aaPredicted RBP12.33□□□□□ -0.44
HERC6-203ENST00000380265 ZC3H15Q8WU90 426 aaKnown RBP12.33□□□□□ -0.44
HERC6-203ENST00000380265 BEGAINQ9BUH8 593 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 LRRC40Q9H9A6 602 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 ATAD3AQ9NVI7 634 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 UBP1Q9NZI7 540 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 XPR1Q9UBH6 696 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 RIPK3Q9Y572 518 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 GMNNO75496 209 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 DDHD2O94830 711 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 STBD1O95210 358 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 NPR1P16066 1061 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 KCNA2P16389 499 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 IREB2P48200 963 aaKnown RBP12.33□□□□□ -0.44
HERC6-203ENST00000380265 PLK1P53350 603 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 MERTKQ12866 999 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 REP15Q6BDI9 236 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 TMEM214Q6NUQ4 689 aaKnown RBP12.33□□□□□ -0.44
HERC6-203ENST00000380265 SPPL2CQ8IUH8 684 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 OR9I1Q8NGQ6 314 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 NSUN6Q8TEA1 469 aaKnown RBP12.33□□□□□ -0.44
HERC6-203ENST00000380265 ARNTL2Q8WYA1 636 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 NEURL2Q9BR09 285 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 HESX1Q9UBX0 185 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 VTI1BQ9UEU0 232 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 VANGL2Q9ULK5 521 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 PCDHGA7Q9Y5G6 932 aa12.33□□□□□ -0.44
HERC6-203ENST00000380265 C9JVG2 144 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 ALDH1A2O94788 518 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 NFICP08651 508 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 LCP1P13796 627 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 MAGEA6P43360 314 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 OCA2Q04671 838 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 MAPRE2Q15555 327 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 UTS2BQ765I0 119 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 KCNMB4Q86W47 210 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 NAT16Q8N8M0 369 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 ATG4CQ96DT6 458 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 P2RY11Q96G91 374 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 NPLQ9BXD5 320 aaPredicted RBP12.32□□□□□ -0.44
HERC6-203ENST00000380265 VPS28Q9UK41 221 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 CORINQ9Y5Q5 1042 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 ZBBXA8MT70 800 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 SLCO1B7G3V0H7 640 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 OXSR1O95747 527 aaPredicted RBP12.32□□□□□ -0.44
HERC6-203ENST00000380265 VDRP11473 427 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 STX1BP61266 288 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 ZIK1Q3SY52 487 aaPredicted RBP12.32□□□□□ -0.44
HERC6-203ENST00000380265 SPANXN3Q5MJ09 141 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 SAMD4BQ5PRF9 694 aaKnown RBP12.32□□□□□ -0.44
HERC6-203ENST00000380265 STEAP4Q687X5 459 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 SNRNP48Q6IEG0 339 aaKnown RBP12.32□□□□□ -0.44
HERC6-203ENST00000380265 HMBOX1Q6NT76 420 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 NIPAL1Q6NVV3 410 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 CCDC138Q96M89 665 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 QKIQ96PU8 341 aaKnown RBP eCLIP12.32□□□□□ -0.44
HERC6-203ENST00000380265 SACM1LQ9NTJ5 587 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 SUCOQ9UBS9 1254 aaKnown RBP12.32□□□□□ -0.44
HERC6-203ENST00000380265 SYNPO2Q9UMS6 1093 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 ST14Q9Y5Y6 855 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 TRPC5OSA6NMA1 111 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 TIMM44O43615 452 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 BAIAP3O94812 1187 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 FASP25445 335 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 SLC12A2P55011 1212 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 NAB1Q13506 487 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 INPP5AQ14642 412 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 GRM3Q14832 879 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 MOGQ16653 247 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 OTUD3Q5T2D3 398 aaPredicted RBP12.32□□□□□ -0.44
HERC6-203ENST00000380265 RPS27LQ71UM5 84 aaKnown RBP12.32□□□□□ -0.44
HERC6-203ENST00000380265 EEPD1Q7L9B9 569 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 TMEM192Q8IY95 271 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 AFAP1L2Q8N4X5 818 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 DHRSXQ8N5I4 330 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 SHCBP1Q8NEM2 672 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 TFAP2CQ92754 450 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 CSPG4P5Q96PW8 444 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 NRBP2Q9NSY0 501 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 TMED5Q9Y3A6 229 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 ADGRA2Q96PE1 1338 aa12.32□□□□□ -0.44
HERC6-203ENST00000380265 NEMP2A6NFY4 417 aa12.31□□□□□ -0.44
HERC6-203ENST00000380265 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.31□□□□□ -0.44
HERC6-203ENST00000380265 KPNA4O00629 521 aaPredicted RBP12.31□□□□□ -0.44
HERC6-203ENST00000380265 HOXC6P09630 235 aa12.31□□□□□ -0.44
HERC6-203ENST00000380265 CASP2P42575 452 aa12.31□□□□□ -0.44
HERC6-203ENST00000380265 SPIDRQ14159 915 aa12.31□□□□□ -0.44
HERC6-203ENST00000380265 MAPK11Q15759 364 aa12.31□□□□□ -0.44
HERC6-203ENST00000380265 TREML2Q5T2D2 321 aa12.31□□□□□ -0.44
HERC6-203ENST00000380265 CERCAMQ5T4B2 595 aa12.31□□□□□ -0.44
HERC6-203ENST00000380265 ABRAXAS1Q6UWZ7 409 aa12.31□□□□□ -0.44
HERC6-203ENST00000380265 ABHD15Q6UXT9 468 aa12.31□□□□□ -0.44
HERC6-203ENST00000380265 SLC41A1Q8IVJ1 513 aa12.31□□□□□ -0.44
HERC6-203ENST00000380265 NRBF2Q96F24 287 aa12.31□□□□□ -0.44
HERC6-203ENST00000380265 TBCBQ99426 244 aa12.31□□□□□ -0.44
HERC6-203ENST00000380265 SNX25Q9H3E2 840 aa12.31□□□□□ -0.44
HERC6-203ENST00000380265 DUS2Q9NX74 493 aaKnown RBP12.31□□□□□ -0.44
HERC6-203ENST00000380265 MTMR10Q9NXD2 777 aa12.31□□□□□ -0.44
HERC6-203ENST00000380265 GIN1Q9NXP7 522 aa12.31□□□□□ -0.44
HERC6-203ENST00000380265 ITGB1BP2Q9UKP3 347 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms