RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 NLRP14Q86W24 1093 aa19.32■□□□□ 0.68
TMEM88B-201ENST00000378821 SAP25Q8TEE9 199 aa19.32■□□□□ 0.68
TMEM88B-201ENST00000378821 CCDC114Q96M63 670 aa19.32■□□□□ 0.68
TMEM88B-201ENST00000378821 TRIM5Q9C035 493 aa19.32■□□□□ 0.68
TMEM88B-201ENST00000378821 CEP44Q9C0F1 390 aa19.32■□□□□ 0.68
TMEM88B-201ENST00000378821 AASDHPPTQ9NRN7 309 aa19.32■□□□□ 0.68
TMEM88B-201ENST00000378821 OR12D3Q9UGF7 316 aa19.32■□□□□ 0.68
TMEM88B-201ENST00000378821 NEU3Q9UQ49 428 aa19.32■□□□□ 0.68
TMEM88B-201ENST00000378821 CHD6Q8TD26 2715 aa19.31■□□□□ 0.68
TMEM88B-201ENST00000378821 CD160O95971 181 aa19.31■□□□□ 0.68
TMEM88B-201ENST00000378821 PRNPP04156 253 aa19.31■□□□□ 0.68
TMEM88B-201ENST00000378821 GLDCP23378 1020 aa19.31■□□□□ 0.68
TMEM88B-201ENST00000378821 GNA12Q03113 381 aa19.31■□□□□ 0.68
TMEM88B-201ENST00000378821 SLC45A4Q5BKX6 768 aa19.31■□□□□ 0.68
TMEM88B-201ENST00000378821 PLEKHA7Q6IQ23 1121 aa19.31■□□□□ 0.68
TMEM88B-201ENST00000378821 RETSATQ6NUM9 610 aa19.31■□□□□ 0.68
TMEM88B-201ENST00000378821 C22orf39Q6P5X5 142 aa19.31■□□□□ 0.68
TMEM88B-201ENST00000378821 LINGO4Q6UY18 593 aa19.31■□□□□ 0.68
TMEM88B-201ENST00000378821 TMPRSS7Q7RTY8 843 aa19.31■□□□□ 0.68
TMEM88B-201ENST00000378821 PLPP6Q8IY26 295 aa19.31■□□□□ 0.68
TMEM88B-201ENST00000378821 OR7D4Q8NG98 312 aa19.31■□□□□ 0.68
TMEM88B-201ENST00000378821 DNAJC7Q99615 494 aa19.31■□□□□ 0.68
TMEM88B-201ENST00000378821 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.31■□□□□ 0.68
TMEM88B-201ENST00000378821 HDAC8Q9BY41 377 aa19.31■□□□□ 0.68
TMEM88B-201ENST00000378821 GDF3Q9NR23 364 aa19.31■□□□□ 0.68
TMEM88B-201ENST00000378821 ZFHX4Q86UP3 3567 aa19.31■□□□□ 0.68
TMEM88B-201ENST00000378821 RNF103O00237 685 aa19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 CCP110O43303 1012 aa19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 RNGTTO60942 597 aaKnown RBP19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 MFAP3LO75121 409 aa19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 SERPINH1P50454 418 aaKnown RBP19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 HDAC4P56524 1084 aa19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 ARF5P84085 180 aa19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 OGDHQ02218 1023 aa19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 CCDC15Q0P6D6 951 aa19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 MAMLD1Q13495 774 aa19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 INAVAQ3KP66 663 aa19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 ARL13BQ3SXY8 428 aa19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 KANSL1Q7Z3B3 1105 aa19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 TMC6Q7Z403 805 aa19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 VPS36Q86VN1 386 aa19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 SPATS2Q86XZ4 545 aaKnown RBP19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 TMEM145Q8NBT3 493 aa19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 CHST14Q8NCH0 376 aa19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 FAM172AQ8WUF8 416 aa19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 NTAN1Q96AB6 310 aa19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 ARRDC3Q96B67 414 aa19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 ZNF653Q96CK0 615 aa19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 ISCUQ9H1K1 167 aa19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 CNOT8Q9UFF9 292 aaKnown RBP19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 FREM2Q5SZK8 3169 aa19.3■□□□□ 0.68
TMEM88B-201ENST00000378821 A0A087X0T9 212 aa19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 SRRM3A6NNA2 597 aaPredicted RBP19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 PRAMEF26H0Y7S4 382 aa19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 TPM1P09493 284 aa19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 FAM228BP0C875 321 aa19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 RHOQP17081 205 aa19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 MAPKAPK2P49137 400 aa19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 ZNF143P52747 638 aaPredicted RBP19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 SCAPQ12770 1279 aa19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 TBX2Q13207 712 aaPredicted RBP19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 SETMARQ53H47 684 aaPredicted RBP19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 PRAMEF14Q5SWL7 426 aa19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 DCUN1D2Q6PH85 259 aa19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 DPY19L3Q6ZPD9 716 aa19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 OXR1Q8N573 874 aa19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 PCDH20Q8N6Y1 951 aaKnown RBP19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 OR8K1Q8NGG5 319 aa19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 ZCCHC14Q8WYQ9 949 aaKnown RBP19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 ISG20Q96AZ6 181 aaKnown RBP19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 ATP13A1Q9HD20 1204 aa19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 ABHD10Q9NUJ1 306 aa19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 PARVAQ9NVD7 372 aa19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 TMEM248Q9NWD8 314 aa19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 IL36AQ9UHA7 158 aa19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 WASF2Q9Y6W5 498 aa19.29■□□□□ 0.68
TMEM88B-201ENST00000378821 ANKRD62A6NC57 917 aa19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 FAM72CH0Y354 149 aa19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 CBX4O00257 560 aa19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 MAGEC1O60732 1142 aa19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 ETFBP38117 255 aa19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 EIF4A3P38919 411 aaKnown RBP19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 ARRB1P49407 418 aaPredicted RBP19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 ADKP55263 362 aaKnown RBP19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 IL9RQ01113 521 aa19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 ZNF284Q2VY69 593 aa19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 POM121L1PQ3SYA9 428 aa19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 FAM72AQ5TYM5 149 aa19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 FAM72DQ6L9T8 149 aa19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 ERN2Q76MJ5 926 aaKnown RBP19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 FAM72BQ86X60 149 aa19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 DRC7Q8IY82 874 aa19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 CCDC185Q8N715 623 aa19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 VOPP1Q96AW1 172 aa19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 TRIM11Q96F44 468 aa19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 SPON2Q9BUD6 331 aa19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 NDFIP2Q9NV92 336 aa19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 NENFQ9UMX5 172 aa19.28■□□□□ 0.68
TMEM88B-201ENST00000378821 TAF4O00268 1085 aa19.27■□□□□ 0.68
TMEM88B-201ENST00000378821 KPNA3O00505 521 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms