RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CLEC10AQ8IUN9 316 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 MCPH1Q8NEM0 835 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 FLAD1Q8NFF5 587 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 GON7Q9BXV9 100 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 HOXD1Q9GZZ0 328 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 THG1LQ9NWX6 298 aaKnown RBP11.92□□□□□ -0.5
NPHP4-202ENST00000378161 SNX8Q9Y5X2 465 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 RNF103O00237 685 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 TRDMT1O14717 391 aaKnown RBP11.92□□□□□ -0.5
NPHP4-202ENST00000378161 ATE1O95260 518 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 IL7P13232 177 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 KELP23276 732 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 CXCR2P25025 360 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 ITPK1Q13572 414 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 RAB39AQ14964 217 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 HSD17B12Q53GQ0 312 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 TBCELQ5QJ74 424 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 SLFN12LQ6IEE8 588 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 TYW3Q6IPR3 259 aaKnown RBP11.92□□□□□ -0.5
NPHP4-202ENST00000378161 SVOPQ8N4V2 548 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 HCAR2Q8TDS4 363 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 EVLQ9UI08 416 aaPredicted RBP11.92□□□□□ -0.5
NPHP4-202ENST00000378161 GRID1Q9ULK0 1009 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 COPG1Q9Y678 874 aaKnown RBP11.92□□□□□ -0.5
NPHP4-202ENST00000378161 NEMP1O14524 444 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 ZMPSTE24O75844 475 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 COX4I1P13073 169 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 IL1R1P14778 569 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 ADRA2BP18089 450 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 MATN1P21941 496 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 AP2S1P53680 142 aaPredicted RBP11.91□□□□□ -0.5
NPHP4-202ENST00000378161 CDK10Q15131 360 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 ZNF568Q3ZCX4 644 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 HES5Q5TA89 166 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 INTS5Q6P9B9 1019 aaKnown RBP11.91□□□□□ -0.5
NPHP4-202ENST00000378161 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.91□□□□□ -0.5
NPHP4-202ENST00000378161 TMEM35BQ8NCS4 154 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 BAP1Q92560 729 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 TXNDC15Q96J42 360 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 FAM118BQ9BPY3 351 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 GTPBP2Q9BX10 602 aaKnown RBP11.91□□□□□ -0.5
NPHP4-202ENST00000378161 PRRG3Q9BZD7 231 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 CACNA2D2Q9NY47 1150 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 MOCS1Q9NZB8 636 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 NYAP2Q9P242 653 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 CNOT11Q9UKZ1 510 aaKnown RBP11.91□□□□□ -0.5
NPHP4-202ENST00000378161 ING4Q9UNL4 249 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 WDR64B1ANS9 1081 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 TRIM49D1C9J1S8 452 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 BUD23O43709 281 aaKnown RBP11.91□□□□□ -0.5
NPHP4-202ENST00000378161 PDGFAP04085 211 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 RALBP11234 206 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 RAB25P57735 213 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 ERVK-8P63133 956 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 GBE1Q04446 702 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 BST1Q10588 318 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 ANKRD26P1Q6NSI1 321 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 ABHD11Q8NFV4 315 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 TESCQ96BS2 214 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 PHOX2BQ99453 314 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 RIOX1Q9H6W3 641 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 RAPGEFL1Q9UHV5 662 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 H0Y858 1186 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 RGS13O14921 159 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 KLRK1P26718 216 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 ALG1LQ6GMV1 187 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 MOXD1Q6UVY6 613 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 ANGPTL8Q6UXH0 198 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 HEXIM2Q96MH2 286 aaKnown RBP11.91□□□□□ -0.5
NPHP4-202ENST00000378161 CLPBQ9H078 707 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 IL17RBQ9NRM6 502 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 ADAM30Q9UKF2 790 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 HSPB11Q9Y547 144 aa11.91□□□□□ -0.5
NPHP4-202ENST00000378161 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.91□□□□□ -0.5
NPHP4-202ENST00000378161 DENND3A2RUS2 1198 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 K7ERI5 159 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 TCEA3O75764 348 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 WEE2P0C1S8 567 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 BAG6P46379 1132 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 CSNK2BP67870 215 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 MTMR1Q13613 665 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 ELOAQ14241 798 aaKnown RBP11.9□□□□□ -0.5
NPHP4-202ENST00000378161 SPCS2Q15005 226 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 QPRTQ15274 297 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 AGR3Q8TD06 166 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 EHD3Q9NZN3 535 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 MID2Q9UJV3 735 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 PEAK1Q9H792 1746 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 GTPBP10A4D1E9 387 aaKnown RBP11.9□□□□□ -0.5
NPHP4-202ENST00000378161 LRRC72A6NJI9 287 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 KPNA7A9QM74 516 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 PTGES3LE9PB15 166 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 hCG_2039718K7EN88 272 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 MED7O43513 233 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 PGK2P07205 417 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 DARS2Q6PI48 645 aaKnown RBP11.9□□□□□ -0.5
NPHP4-202ENST00000378161 CCBE1Q6UXH8 406 aaPredicted RBP11.9□□□□□ -0.5
NPHP4-202ENST00000378161 UNC5AQ6ZN44 842 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 RASAL3Q86YV0 1011 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 PNMA5Q96PV4 448 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms