RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 EFHD1Q9BUP0 239 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 MUC3BQ9H195 1237 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 CHRAC1Q9NRG0 131 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 MAP3K20Q9NYL2 800 aaKnown RBP16.09■□□□□ 0.17
CKAP4-201ENST00000378026 UBP1Q9NZI7 540 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 EGFL7Q9UHF1 273 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 RBM47A0AV96 593 aaKnown RBP16.08■□□□□ 0.17
CKAP4-201ENST00000378026 MPOP05164 745 aa16.08■□□□□ 0.17
CKAP4-201ENST00000378026 SLC7A1P30825 629 aa16.08■□□□□ 0.17
CKAP4-201ENST00000378026 EN1Q05925 392 aaPredicted RBP16.08■□□□□ 0.17
CKAP4-201ENST00000378026 NSUN2Q08J23 767 aaKnown RBP eCLIP16.08■□□□□ 0.17
CKAP4-201ENST00000378026 PLCL1Q15111 1095 aa16.08■□□□□ 0.17
CKAP4-201ENST00000378026 MAP7D1Q3KQU3 841 aa16.08■□□□□ 0.17
CKAP4-201ENST00000378026 ATF7IP2Q5U623 682 aa16.08■□□□□ 0.17
CKAP4-201ENST00000378026 REP15Q6BDI9 236 aa16.08■□□□□ 0.17
CKAP4-201ENST00000378026 EEPD1Q7L9B9 569 aa16.08■□□□□ 0.17
CKAP4-201ENST00000378026 ACOT1Q86TX2 421 aa16.08■□□□□ 0.17
CKAP4-201ENST00000378026 ZC3H7AQ8IWR0 971 aaKnown RBP16.08■□□□□ 0.17
CKAP4-201ENST00000378026 ZNF567Q8N184 647 aa16.08■□□□□ 0.17
CKAP4-201ENST00000378026 FSTL5Q8N475 847 aaPredicted RBP16.08■□□□□ 0.17
CKAP4-201ENST00000378026 PBXIP1Q96AQ6 731 aa16.08■□□□□ 0.17
CKAP4-201ENST00000378026 NEMP2A6NFY4 417 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 MDM4O15151 490 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 SLC7A2P52569 658 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 SLC6A3Q01959 620 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 GRM1Q13255 1194 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 PRPSAP1Q14558 356 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 SPANXN3Q5MJ09 141 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 CLEC14AQ86T13 490 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 ZBTB8OSQ8IWT0 167 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 SLC15A4Q8N697 577 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 HPDLQ96IR7 371 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 RPL10LQ96L21 214 aaKnown RBP16.08■□□□□ 0.16
CKAP4-201ENST00000378026 TBCBQ99426 244 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 ADI1Q9BV57 179 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 UNC93B1Q9H1C4 597 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 CYP4F12Q9HCS2 524 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 CACNA2D2Q9NY47 1150 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 KLHL8Q9P2G9 620 aaPredicted RBP16.08■□□□□ 0.16
CKAP4-201ENST00000378026 XPR1Q9UBH6 696 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 SUCOQ9UBS9 1254 aaKnown RBP16.08■□□□□ 0.16
CKAP4-201ENST00000378026 TSC22D4Q9Y3Q8 395 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 TLL2Q9Y6L7 1015 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 KCNH1O95259 989 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 LCP1P13796 627 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 MAP4P27816 1152 aaKnown RBP16.08■□□□□ 0.16
CKAP4-201ENST00000378026 CHRNA5P30532 468 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 GRM5P41594 1212 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 FASTKQ14296 549 aaKnown RBP16.08■□□□□ 0.16
CKAP4-201ENST00000378026 TBCELQ5QJ74 424 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 ZYG11AQ6WRX3 759 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 KCNMB4Q86W47 210 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 DHFR2Q86XF0 187 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 SIX6OS1Q8N1H7 587 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 TRPC4APQ8TEL6 797 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 TRAPPC12Q8WVT3 735 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 HEPHQ9BQS7 1158 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 LRRC40Q9H9A6 602 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 VANGL2Q9ULK5 521 aa16.08■□□□□ 0.16
CKAP4-201ENST00000378026 ATP6AP2A0A1C7CYW4 349 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 SPATA31C2B4DYI2 1134 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 DLX3O60479 287 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 ATP6AP2O75787 350 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 MMP10P09238 476 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 ARL4AP40617 200 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 NR2C2P49116 596 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 NAB1Q13506 487 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 RFTN1Q14699 578 aaPredicted RBP16.07■□□□□ 0.16
CKAP4-201ENST00000378026 MPZL3Q6UWV2 235 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 KCTD8Q6ZWB6 473 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 TANKQ92844 425 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 MTG1Q9BT17 334 aaPredicted RBP16.07■□□□□ 0.16
CKAP4-201ENST00000378026 TRIM8Q9BZR9 551 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 PRDM12Q9H4Q4 367 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 RGPD3A6NKT7 1758 aaPredicted RBP16.07■□□□□ 0.16
CKAP4-201ENST00000378026 RGPD4Q7Z3J3 1758 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 C9JVG2 144 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 SDHDO14521 159 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 B4GALT4O60513 344 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 NR4A1P22736 598 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 HERC3Q15034 1050 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 DPYSL2Q16555 572 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 GALNT18Q6P9A2 607 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 TTC30AQ86WT1 665 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 SLC41A1Q8IVJ1 513 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 NDRG1Q92597 394 aaKnown RBP16.07■□□□□ 0.16
CKAP4-201ENST00000378026 NAT9Q9BTE0 207 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 SPAG4Q9NPE6 437 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 NRBP2Q9NSY0 501 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 BFARQ9NZS9 450 aa16.07■□□□□ 0.16
CKAP4-201ENST00000378026 H0YJX3 145 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 MRASO14807 208 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 GPC4O75487 556 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 EEF1B2P24534 225 aaKnown RBP16.06■□□□□ 0.16
CKAP4-201ENST00000378026 MAGEA12P43365 314 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 STAT5BP51692 787 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 EFNA5P52803 228 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 PPP4R4Q6NUP7 873 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 RNF135Q8IUD6 432 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 SPPL2CQ8IUH8 684 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms