RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 DENND1AQ8TEH3 1009 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 CELF1Q92879 486 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 TFB2MQ9H5Q4 396 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 KRT82Q9NSB4 513 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 EEF2KO00418 725 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 ULK1O75385 1050 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 C1RP00736 705 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 PTBP1P26599 531 aaKnown RBP eCLIP5□□□□□ -1.61
PCDH9-201ENST00000377861 TRAM1Q15629 374 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 IMPG1Q17R60 797 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 NAIF1Q69YI7 327 aaPredicted RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 GDAP1Q8TB36 358 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 C11orf70Q9BRQ4 267 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 MRPL9Q9BYD2 267 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 ZC3H4Q9UPT8 1303 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 ANXA8P13928 327 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 BTBD8Q5XKL5 378 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 CPSF7Q8N684 471 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 CPA5Q8WXQ8 436 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 ZIM2Q9NZV7 527 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 PDE5AO76074 875 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 MYBL2P10244 700 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 ADRA1BP35368 520 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 ALDH5A1P51649 535 aaPredicted RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 SNX32Q86XE0 403 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 LENG1Q96BZ8 264 aaPredicted RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 CXorf40BQ96DE9 158 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 ZSCAN32Q9NX65 697 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 CLDN25C9JDP6 229 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 RAB10P61026 200 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 SCN1BQ07699 218 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 AVL9Q8NBF6 648 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 MCEEQ96PE7 176 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 GJB4Q9NTQ9 266 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 STAU2Q9NUL3 570 aaKnown RBP eCLIP5□□□□□ -1.61
PCDH9-201ENST00000377861 AKAP10O43572 662 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 THP07101 528 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 PSMC6P62333 389 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 LCP2Q13094 533 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 TSNQ15631 228 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 ATP6AP1LQ52LC2 224 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 HSD17B12Q53GQ0 312 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 EFCAB12Q6NXP0 572 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 TMEM135Q86UB9 458 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 MIOSQ9NXC5 875 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 GTF2IRD1Q9UHL9 959 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 CFL2Q9Y281 166 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 RNASEH1O60930 286 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 LTA4HP09960 611 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 CLK1P49759 484 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 SLC47A2Q86VL8 602 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 SLC4A5Q9BY07 1137 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 PCIF1Q9H4Z3 704 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 CEP170BQ9Y4F5 1589 aaPredicted RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 CRYBB1P53674 252 aaPredicted RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 SPP2Q13103 211 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 PPTC7Q8NI37 304 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 CRYGNQ8WXF5 182 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 C9orf72Q96LT7 481 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 GCNAQ96QF7 691 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 FRMPD2Q68DX3 1309 aaPredicted RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 DLDP09622 509 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 PSMA1P25786 263 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 CDK9P50750 372 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 PKN3Q6P5Z2 889 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 CYP2U1Q7Z449 544 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 UCMAQ8WVF2 138 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 ACBD6Q9BR61 282 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 TDRD1Q9BXT4 1180 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 PDZD7Q9H5P4 517 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 TAS2R7Q9NYW3 318 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 ASTN1O14525 1302 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 EFCAB10A6NFE3 127 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 SCN2BO60939 215 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 VNN2O95498 520 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 DDR2Q16832 855 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 ITIH5Q86UX2 942 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 HID1Q8IV36 788 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 C2orf49Q9BVC5 232 aaPredicted RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 IL25Q9H293 177 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5□□□□□ -1.61
PCDH9-201ENST00000377861 TRAF6Q9Y4K3 522 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 SESN1Q9Y6P5 492 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 COL2A1P02458 1487 aaPredicted RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 KCNJ13O60928 360 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 LATS1O95835 1130 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 CLCN4P51793 760 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 LBX2Q6XYB7 198 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 ZCCHC7Q8N3Z6 543 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 CAMKK2Q96RR4 588 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 TLR8Q9NR97 1041 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 NINJ2Q9NZG7 142 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 SH3D21A4FU49 640 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 FAM153BP0C7A2 387 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 FAM153CQ494X1 144 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 MCRS1Q96EZ8 462 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 TTLL13PA6NNM8 815 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 WDR47O94967 919 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 NRG1Q02297 640 aaPredicted RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 TCP10Q12799 353 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms