RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 AP3M1Q9Y2T2 418 aa18■□□□□ 0.47
CNTNAP3-204ENST00000377656 ANXA6P08133 673 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 DDR2Q16832 855 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 ABHD15Q6UXT9 468 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 PTF1AQ7RTS3 328 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 ITFG1Q8TB96 612 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 DUSP16Q9BY84 665 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 FSBPO95073 299 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 DLGAP3O95886 979 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 PRKAR2AP13861 404 aaKnown RBP17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 PSMB9P28065 219 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 PPP1R26Q5T8A7 1209 aaPredicted RBP17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 CASP12Q6UXS9 341 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 SLC41A1Q8IVJ1 513 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 NKX2-3Q8TAU0 364 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 LRCH1Q9Y2L9 728 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 ANKDD1BA6NHY2 528 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 SNX3O60493 162 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 GUCY1B2O75343 617 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 HSDL1Q3SXM5 330 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 DUSP28Q4G0W2 176 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 TTC7BQ86TV6 843 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 FAM35AQ86V20 835 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 ATL1Q8WXF7 558 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 TNFRSF25Q93038 417 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 SKA1Q96BD8 255 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 RMND5BQ96G75 393 aaPredicted RBP17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 VMP1Q96GC9 406 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 RNPEPQ9H4A4 650 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 RAD21L1Q9H4I0 556 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 INVSQ9Y283 1065 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 REXO2Q9Y3B8 237 aaKnown RBP17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 PEX1O43933 1283 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 CNPP09543 421 aaKnown RBP17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 TFEBP19484 476 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 NOS3P29474 1203 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 LRPAP1P30533 357 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 TAS2R40P59535 323 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 KRR1Q13601 381 aaKnown RBP17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 PTPRNQ16849 979 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 FAM187BQ17R55 369 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 INSCQ1MX18 579 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 SETD9Q8NE22 299 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 ACSS3Q9H6R3 686 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 PRKAG3Q9UGI9 489 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 GNPTGQ9UJJ9 305 aa17.99■□□□□ 0.47
CNTNAP3-204ENST00000377656 SLIT3O75094 1523 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 WNT7AO00755 349 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 ABL2P42684 1182 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 SMAD3P84022 425 aaKnown RBP17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 CREMQ03060 361 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 FGD2Q7Z6J4 655 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 C4orf32Q8N8J7 132 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 PPTC7Q8NI37 304 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 ELMO1Q92556 727 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 APOL4Q9BPW4 351 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 CORO1BQ9BR76 489 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 BTBD7Q9P203 1132 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 SLC27A5Q9Y2P5 690 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 MRPS23Q9Y3D9 190 aaKnown RBP17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 A0A088AWK7 358 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 SNHG28P0DPA3 235 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 ZNF10P21506 573 aaPredicted RBP17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 NOGQ13253 232 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 HLA-DQA1Q5Y7H0 255 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 AFTPHQ6ULP2 937 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 PIWIL4Q7Z3Z4 852 aaKnown RBP17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 LUZP2Q86TE4 346 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 ZDHHC13Q8IUH4 622 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 MYBL2P10244 700 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 COX7A2P14406 83 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 YTHDF3Q7Z739 585 aaKnown RBP17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 METTL3Q86U44 580 aaKnown RBP17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 PACS2Q86VP3 889 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 C9orf16Q9BUW7 83 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 H3BN98 237 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 CLDN5O00501 218 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 KPNA5O15131 536 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 HS6ST1O60243 411 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 TLR5O60602 858 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 EPN2O95208 641 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 CLK2P49760 499 aaKnown RBP17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 FGD3Q5JSP0 725 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 TREML2Q5T2D2 321 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 CES5AQ6NT32 575 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 TMEM199Q8N511 208 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 HJURPQ8NCD3 748 aaPredicted RBP17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 PRCCQ92733 491 aaPredicted RBP17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 NXF3Q9H4D5 531 aaKnown RBP17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 PAIP2BQ9ULR5 123 aaKnown RBP17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 DERAQ9Y315 318 aa17.98■□□□□ 0.47
CNTNAP3-204ENST00000377656 FAM20BO75063 409 aa17.97■□□□□ 0.47
CNTNAP3-204ENST00000377656 ADH1AP07327 375 aa17.97■□□□□ 0.47
CNTNAP3-204ENST00000377656 NUDT17P0C025 328 aa17.97■□□□□ 0.47
CNTNAP3-204ENST00000377656 GTF2E2P29084 291 aaKnown RBP17.97■□□□□ 0.47
CNTNAP3-204ENST00000377656 HIRAP54198 1017 aaPredicted RBP17.97■□□□□ 0.47
CNTNAP3-204ENST00000377656 CACNA2D1P54289 1103 aa17.97■□□□□ 0.47
CNTNAP3-204ENST00000377656 PKNOX1P55347 436 aa17.97■□□□□ 0.47
CNTNAP3-204ENST00000377656 MON1AQ86VX9 555 aa17.97■□□□□ 0.47
CNTNAP3-204ENST00000377656 UBE2E3Q969T4 207 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms