RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 GALNT18Q6P9A2 607 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 EXOC8Q8IYI6 725 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 PDZD8Q8NEN9 1154 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 SLC35B2Q8TB61 432 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 C18orf25Q96B23 403 aaPredicted RBP12.33□□□□□ -0.44
C9orf3-203ENST00000375315 ZNF641Q96N77 438 aaPredicted RBP12.33□□□□□ -0.44
C9orf3-203ENST00000375315 TRMT13Q9NUP7 481 aaKnown RBP12.33□□□□□ -0.44
C9orf3-203ENST00000375315 ZNF839A8K0R7 811 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 PPEF2O14830 753 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 TLR3O15455 904 aaKnown RBP12.33□□□□□ -0.44
C9orf3-203ENST00000375315 BCAS2O75934 225 aaPredicted RBP12.33□□□□□ -0.44
C9orf3-203ENST00000375315 RPL22P35268 128 aaKnown RBP12.33□□□□□ -0.44
C9orf3-203ENST00000375315 THPOP40225 353 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 SNRPFP62306 86 aaKnown RBP12.33□□□□□ -0.44
C9orf3-203ENST00000375315 SLC10A6Q3KNW5 377 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 PIGGQ5H8A4 983 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 TFDP3Q5H9I0 405 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 TMEM26Q6ZUK4 368 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 IGDCC3Q8IVU1 814 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 PDPRQ8NCN5 879 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 EMID1Q96A84 441 aaPredicted RBP12.33□□□□□ -0.44
C9orf3-203ENST00000375315 NPLQ9BXD5 320 aaPredicted RBP12.33□□□□□ -0.44
C9orf3-203ENST00000375315 IP6K2Q9UHH9 426 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 hCG_1818297A0A087WSY0 165 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 TCRBV7S3A2A0A539 114 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 BCL10O95999 233 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 GABRB3P28472 473 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 PRAMEP78395 509 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 AGAP7PQ5VUJ5 663 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 DSELQ8IZU8 1212 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 TMCO5AQ8N6Q1 288 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 ATP6V0D2Q8N8Y2 350 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 LPPQ93052 612 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 CFAP36Q96G28 342 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 C11orf70Q9BRQ4 267 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 TRPV6Q9H1D0 765 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 PNPLA8Q9NP80 782 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 POU2F3Q9UKI9 436 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 PCDHB2Q9Y5E7 798 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 TRPM7Q96QT4 1865 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 RRN3P2A6NIE6 340 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 CFLARO15519 480 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 PARNO95453 639 aaKnown RBP12.32□□□□□ -0.44
C9orf3-203ENST00000375315 SERPINE1P05121 402 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 CCNA2P20248 432 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 CUL2Q13617 745 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 BMPR2Q13873 1038 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 C14orf80Q86SX3 495 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 ZNF677Q86XU0 584 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 ACDQ96AP0 544 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 TNFSF13BQ9Y275 285 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 STYXL1Q9Y6J8 313 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 ARID2Q68CP9 1835 aa12.32□□□□□ -0.44
C9orf3-203ENST00000375315 DUSP11O75319 330 aaKnown RBP12.31□□□□□ -0.44
C9orf3-203ENST00000375315 MYO1DO94832 1006 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 ALDH1A1P00352 501 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 CYBAP13498 195 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 PTPN7P35236 360 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 MSX2P35548 267 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-203ENST00000375315 GNL1P36915 607 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-203ENST00000375315 APLP1P51693 650 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 ATXN3P54252 364 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-203ENST00000375315 ADAM17P78536 824 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 NFATC3Q12968 1075 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 PAN2Q504Q3 1202 aaKnown RBP12.31□□□□□ -0.44
C9orf3-203ENST00000375315 MBLAC2Q68D91 279 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 MON1BQ7L1V2 547 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 MAVSQ7Z434 540 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 C1orf127Q8N9H9 656 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 LILRB4Q8NHJ6 448 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 TANKQ92844 425 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 ZFP42Q96MM3 310 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 LENG8Q96PV6 779 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-203ENST00000375315 ALPK1Q96QP1 1244 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 LPIN3Q9BQK8 851 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 SLC4A5Q9BY07 1137 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 SEMA6AQ9H2E6 1030 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 PNPOQ9NVS9 261 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 ITM2BQ9Y287 266 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 TRIM64BA6NI03 449 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 HTRA2O43464 458 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-203ENST00000375315 RSL1D1O76021 490 aaKnown RBP12.31□□□□□ -0.44
C9orf3-203ENST00000375315 ZNF182P17025 639 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-203ENST00000375315 GRK2P25098 689 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 GNA15P30679 374 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 GABRB2P47870 512 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 PKNOX1P55347 436 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 RPL10AP62906 217 aaKnown RBP12.31□□□□□ -0.44
C9orf3-203ENST00000375315 MS4A2Q01362 244 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 MAMLD1Q13495 774 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 RAB39AQ14964 217 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 SNX17Q15036 470 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 LRRC38Q5VT99 294 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 TRIM72Q6ZMU5 477 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 ANKK1Q8NFD2 765 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 OR7G1Q8NGA0 311 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 USP33Q8TEY7 942 aa12.31□□□□□ -0.44
C9orf3-203ENST00000375315 ZNF296Q8WUU4 475 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-203ENST00000375315 FRMD8P1Q9BZ68 369 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-203ENST00000375315 MOV10Q9HCE1 1003 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms