RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 HMGXB4Q9UGU5 601 aa10.31□□□□□ -0.76
PTCH1-204ENST00000375290 SEMA3DO95025 777 aa10.31□□□□□ -0.76
PTCH1-204ENST00000375290 OTCP00480 354 aa10.31□□□□□ -0.76
PTCH1-204ENST00000375290 CBX3Q13185 183 aa10.31□□□□□ -0.76
PTCH1-204ENST00000375290 MAPKAPK3Q16644 382 aa10.31□□□□□ -0.76
PTCH1-204ENST00000375290 RBM12BQ8IXT5 1001 aaKnown RBP10.31□□□□□ -0.76
PTCH1-204ENST00000375290 ANKRD52Q8NB46 1076 aa10.31□□□□□ -0.76
PTCH1-204ENST00000375290 MAGEE2Q8TD90 523 aaPredicted RBP10.31□□□□□ -0.76
PTCH1-204ENST00000375290 ADAMDEC1O15204 470 aa10.31□□□□□ -0.76
PTCH1-204ENST00000375290 RNASEH1O60930 286 aaKnown RBP10.31□□□□□ -0.76
PTCH1-204ENST00000375290 NPPAP01160 153 aa10.31□□□□□ -0.76
PTCH1-204ENST00000375290 CALCAP01258 141 aa10.31□□□□□ -0.76
PTCH1-204ENST00000375290 DPY19L1Q2PZI1 675 aa10.31□□□□□ -0.76
PTCH1-204ENST00000375290 CCNYL2Q5T2Q4 361 aa10.31□□□□□ -0.76
PTCH1-204ENST00000375290 PEX5LQ8IYB4 626 aa10.31□□□□□ -0.76
PTCH1-204ENST00000375290 POC5Q8NA72 575 aa10.31□□□□□ -0.76
PTCH1-204ENST00000375290 SUN5Q8TC36 379 aa10.31□□□□□ -0.76
PTCH1-204ENST00000375290 FAR1Q8WVX9 515 aa10.31□□□□□ -0.76
PTCH1-204ENST00000375290 FAM84AQ96KN4 292 aa10.31□□□□□ -0.76
PTCH1-204ENST00000375290 SPON2Q9BUD6 331 aa10.31□□□□□ -0.76
PTCH1-204ENST00000375290 MID1IP1Q9NPA3 183 aa10.31□□□□□ -0.76
PTCH1-204ENST00000375290 BTN3A3O00478 584 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 KPNA3O00505 521 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-204ENST00000375290 KPNA6O60684 536 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 ASMTLO95671 621 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 ITGB3P05106 788 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 DALRD3Q5D0E6 543 aaKnown RBP10.3□□□□□ -0.76
PTCH1-204ENST00000375290 ZNF57Q68EA5 555 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-204ENST00000375290 POPDC2Q9HBU9 364 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 G3V2T6 193 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 VAPBO95292 243 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 POLR2LP62875 67 aaKnown RBP10.3□□□□□ -0.76
PTCH1-204ENST00000375290 ZNF829Q3KNS6 432 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-204ENST00000375290 FITM2Q8N6M3 262 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 METTL6Q8TCB7 284 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 ASB9Q96DX5 294 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 PDCD10Q9BUL8 212 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 DYRK1BQ9Y463 629 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 GMPPBQ9Y5P6 360 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 FAM237BA0A1B0GVD1 139 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 ISPDA4D126 451 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 SLC28A1O00337 649 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 KRT36O76013 467 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 ITGA2BP08514 1039 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 TRIM40Q6P9F5 258 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 CBWD2Q8IUF1 395 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 CACTIN-AS1Q8N1I8 211 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 FAM118BQ9BPY3 351 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 MUC3BQ9H195 1237 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 LIMD1Q9UGP4 676 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 BPGMP07738 259 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 TDRD10Q5VZ19 366 aaKnown RBP10.3□□□□□ -0.76
PTCH1-204ENST00000375290 TCAIMQ8N3R3 496 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 SMARCD1Q96GM5 515 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 TBL1YQ9BQ87 522 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 RHOJQ9H4E5 214 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 C10orf71Q711Q0 1435 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 ZSCAN5CA6NGD5 496 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-204ENST00000375290 ZNF701M0R085 212 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-204ENST00000375290 GLRA2P23416 452 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 PPP3CCP48454 512 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 ANXA8L1Q5VT79 327 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 IL31Q6EBC2 164 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 FIG4Q92562 907 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 TTYH3Q9C0H2 523 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 ANGPT4Q9Y264 503 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 FNDC3AQ9Y2H6 1198 aaKnown RBP10.3□□□□□ -0.76
PTCH1-204ENST00000375290 hCG_1818297A0A087WSY0 165 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 NTSR2O95665 410 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 SUPT20HL2P0C7V6 817 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 TXNP10599 105 aaKnown RBP10.3□□□□□ -0.76
PTCH1-204ENST00000375290 CRTC3Q6UUV7 619 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 OTOP1Q7RTM1 612 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 LRRN4CLQ8ND94 238 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 C9orf43Q8TAL5 461 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-204ENST00000375290 ARMCX1Q9P291 453 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 MYH6P13533 1939 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 TCRBV9S1A1TA0A576 114 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 KLRC4O43908 158 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 GPR15P49685 360 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 EIF5AP63241 154 aaKnown RBP10.3□□□□□ -0.76
PTCH1-204ENST00000375290 TYW3Q6IPR3 259 aaKnown RBP10.3□□□□□ -0.76
PTCH1-204ENST00000375290 RETSATQ6NUM9 610 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 HERC6Q8IVU3 1022 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 FLCNQ8NFG4 579 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 ZFP28Q8NHY6 868 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 MCFD2Q8NI22 146 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 CAPSLQ8WWF8 208 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 BLOC1S4Q9NUP1 217 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 INTS10Q9NVR2 710 aaKnown RBP10.3□□□□□ -0.76
PTCH1-204ENST00000375290 PIGNO95427 931 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 SNAP47Q5SQN1 464 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 TMEM110Q86TL2 294 aa10.3□□□□□ -0.76
PTCH1-204ENST00000375290 CLRN2A0PK11 232 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 FAAP100Q0VG06 881 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 OTUD3Q5T2D3 398 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-204ENST00000375290 OR52L1Q8NGH7 329 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 ELOVL4Q9GZR5 314 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 FAM49AQ9H0Q0 323 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-204ENST00000375290 SPASTQ9UBP0 616 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms