RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 PCDHGA11Q9Y5H2 935 aa13.09□□□□□ -0.31
PRPF4-201ENST00000374198 COPG1Q9Y678 874 aaKnown RBP13.09□□□□□ -0.31
PRPF4-201ENST00000374198 RNF103-CHMP3A0A140T963 221 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 KPNA7A9QM74 516 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 PHGDHO43175 533 aaKnown RBP13.08□□□□□ -0.32
PRPF4-201ENST00000374198 NPTX2P47972 431 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 PRKAA2P54646 552 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 CLDN10P78369 228 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 SPCS2Q15005 226 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 C6orf10Q5SRN2 563 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 TREML2Q5T2D2 321 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 FAM102BQ5T8I3 360 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 STRIP1Q5VSL9 837 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 SIGIRRQ6IA17 410 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 UGT3A1Q6NUS8 523 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 ZNF773Q6PK81 442 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 SAMD7Q7Z3H4 446 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 PIWIL3Q7Z3Z3 882 aaKnown RBP13.08□□□□□ -0.32
PRPF4-201ENST00000374198 AGBL3Q8NEM8 1001 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 USP33Q8TEY7 942 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 S100ZQ8WXG8 99 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 CDKL2Q92772 493 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 NRBF2Q96F24 287 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 TXNDC15Q96J42 360 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 IFT80Q9P2H3 777 aaPredicted RBP13.08□□□□□ -0.32
PRPF4-201ENST00000374198 CDYLQ9Y232 598 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 PSAT1Q9Y617 370 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 DGKBQ9Y6T7 804 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 LOXHD1Q8IVV2 1947 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 KCNU1A8MYU2 1149 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 M0QX08 132 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 H2AFYO75367 372 aaKnown RBP13.08□□□□□ -0.32
PRPF4-201ENST00000374198 CFBP00751 764 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 HSPA1AP0DMV8 641 aaKnown RBP13.08□□□□□ -0.32
PRPF4-201ENST00000374198 HSPA1BP0DMV9 641 aaKnown RBP13.08□□□□□ -0.32
PRPF4-201ENST00000374198 KRT3P12035 628 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 CXCR2P25025 360 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 RBL1P28749 1068 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 MPP1Q00013 466 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 NSUN2Q08J23 767 aaKnown RBP eCLIP13.08□□□□□ -0.32
PRPF4-201ENST00000374198 PDK2Q15119 407 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 CCNYL2Q5T2Q4 361 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 TAS2R42Q7RTR8 314 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 SIX5Q8N196 739 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 TTC39CQ8N584 583 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 WDTC1Q8N5D0 677 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 TRPM4Q8TD43 1214 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 GATA5Q9BWX5 397 aaPredicted RBP13.08□□□□□ -0.32
PRPF4-201ENST00000374198 LHPPQ9H008 270 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 TBC1D14Q9P2M4 693 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 DAGLAQ9Y4D2 1042 aa13.08□□□□□ -0.32
PRPF4-201ENST00000374198 TMEM150BA6NC51 233 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.07□□□□□ -0.32
PRPF4-201ENST00000374198 AURKAO14965 403 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 TFEBP19484 476 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 TBXAS1P24557 533 aaPredicted RBP13.07□□□□□ -0.32
PRPF4-201ENST00000374198 ZNF132P52740 706 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 HK2P52789 917 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 LRIT3Q3SXY7 679 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 MFSD14BQ5SR56 506 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 STEAP4Q687X5 459 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 GK5Q6ZS86 529 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 RFPL4BQ6ZWI9 263 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 SLC22A16Q86VW1 577 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 DHFR2Q86XF0 187 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 PLD6Q8N2A8 252 aaKnown RBP13.07□□□□□ -0.32
PRPF4-201ENST00000374198 MED30Q96HR3 178 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 C9orf16Q9BUW7 83 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 UPF3AQ9H1J1 476 aaKnown RBP13.07□□□□□ -0.32
PRPF4-201ENST00000374198 QPCTLQ9NXS2 382 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 CD300AQ9UGN4 299 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 LOC105371267A0A1B0GV96 52 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 SLURP2P0DP57 97 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 C7P10643 843 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 TFE3P19532 575 aaPredicted RBP13.07□□□□□ -0.32
PRPF4-201ENST00000374198 MIPP30301 263 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 SERPINB1P30740 379 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 CAPGP40121 348 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 APLP1P51693 650 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 TRIM32Q13049 653 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 WDR45BQ5MNZ6 344 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 DACT2Q5SW24 774 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 BTBD8Q5XKL5 378 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 KIAA0408Q6ZU52 694 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 DCP2Q8IU60 420 aaKnown RBP13.07□□□□□ -0.32
PRPF4-201ENST00000374198 DHRSXQ8N5I4 330 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 OR2T34Q8NGX1 318 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 OR2T3Q8NH03 318 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 STON2Q8WXE9 905 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 RIT2Q99578 217 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 C17orf80Q9BSJ5 609 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 ZNF518BQ9C0D4 1074 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 TRIT1Q9H3H1 467 aaKnown RBP13.07□□□□□ -0.32
PRPF4-201ENST00000374198 MAGEE1Q9HCI5 957 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 SPAG4Q9NPE6 437 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 MTMR10Q9NXD2 777 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 SARDHQ9UL12 918 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 ITM2BQ9Y287 266 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 RAD54BQ9Y620 910 aa13.07□□□□□ -0.32
PRPF4-201ENST00000374198 TANC1Q9C0D5 1861 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms