RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 H3BQF6 201 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 IL1R1P14778 569 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 TSHRP16473 764 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 PLK1P53350 603 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 HYIQ5T013 277 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 LIN54Q6MZP7 749 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 OTOP1Q7RTM1 612 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 NELL1Q92832 810 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 NARS2Q96I59 477 aaKnown RBP11.66□□□□□ -0.54
VCL-202ENST00000372755 TINF2Q9BSI4 451 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 TMEM134Q9H6X4 195 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 DNAJC18Q9H819 358 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 SLC9A8Q9Y2E8 581 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 SALL1Q9NSC2 1324 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 PSMG1O95456 288 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 ERVK-9P63128 1117 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 PFKFB4Q16877 469 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 DDI2Q5TDH0 399 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 PACS1Q6VY07 963 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 SLC30A10Q6XR72 485 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 CERKQ8TCT0 537 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 ZNF184Q99676 751 aaPredicted RBP11.66□□□□□ -0.54
VCL-202ENST00000372755 ARMCX1Q9P291 453 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 BTBD3Q9Y2F9 522 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 C1QTNF3-AMACRE9PGA6 284 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 NDUFS2O75306 463 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 TTPAP49638 278 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 IQSEC1Q6DN90 963 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 R3HCC1LQ7Z5L2 792 aaKnown RBP11.66□□□□□ -0.54
VCL-202ENST00000372755 SLC35C1Q96A29 364 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 DGCR6LQ9BY27 220 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 DDX18Q9NVP1 670 aaKnown RBP11.66□□□□□ -0.54
VCL-202ENST00000372755 DNMT3LQ9UJW3 386 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 IQSEC2Q5JU85 1478 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 SH3BGRLO75368 114 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 CABYRO75952 493 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 FTH1P02794 183 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 PAX3P23760 479 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 TPP2P29144 1249 aaPredicted RBP11.66□□□□□ -0.54
VCL-202ENST00000372755 FSCN1Q16658 493 aaKnown RBP11.66□□□□□ -0.54
VCL-202ENST00000372755 WDR59Q6PJI9 974 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 OFCC1Q8IZS5 231 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 C18orf25Q96B23 403 aaPredicted RBP11.66□□□□□ -0.54
VCL-202ENST00000372755 CXorf40BQ96DE9 158 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 ASB8Q9H765 288 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 COG5Q9UP83 839 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 FAM50BQ9Y247 325 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 TBC1D3BA6NDS4 549 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 OPLAHO14841 1288 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 PTPN1P18031 435 aaKnown RBP11.66□□□□□ -0.54
VCL-202ENST00000372755 ATP5F1P24539 256 aaPredicted RBP11.66□□□□□ -0.54
VCL-202ENST00000372755 ADRA1DP25100 572 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 ADORA2AP29274 412 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 TAF5Q15542 800 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 NET1Q7Z628 596 aaPredicted RBP11.66□□□□□ -0.54
VCL-202ENST00000372755 MCRS1Q96EZ8 462 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 VPS4AQ9UN37 437 aa11.66□□□□□ -0.54
VCL-202ENST00000372755 DLC1Q96QB1 1528 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 ZBTB22O15209 634 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 PSEN1P49768 467 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 PRKAG1P54619 331 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 IFI35P80217 286 aaPredicted RBP11.65□□□□□ -0.54
VCL-202ENST00000372755 BROXQ5VW32 411 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 INTS5Q6P9B9 1019 aaKnown RBP11.65□□□□□ -0.54
VCL-202ENST00000372755 EFCAB3Q8N7B9 438 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 SENP8Q96LD8 212 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 OR12D3Q9UGF7 316 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 C15orf41Q9Y2V0 281 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 PDE2AO00408 941 aaPredicted RBP11.65□□□□□ -0.54
VCL-202ENST00000372755 DDX3XO00571 662 aaKnown RBP eCLIP11.65□□□□□ -0.543e-26■□□□□ 8.4
VCL-202ENST00000372755 KRT33AO76009 404 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 RPA3P35244 121 aaPredicted RBP11.65□□□□□ -0.54
VCL-202ENST00000372755 TGFBR2P37173 567 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 IDH2P48735 452 aaKnown RBP11.65□□□□□ -0.54
VCL-202ENST00000372755 CDH8P55286 799 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 SRP54P61011 504 aaKnown RBP11.65□□□□□ -0.54
VCL-202ENST00000372755 ACVR2BQ13705 512 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 IKBKEQ14164 716 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 TPGS1Q6ZTW0 290 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 PTGR2Q8N8N7 351 aaPredicted RBP11.65□□□□□ -0.54
VCL-202ENST00000372755 VPS35Q96QK1 796 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 PPIEQ9UNP9 301 aaKnown RBP11.65□□□□□ -0.54
VCL-202ENST00000372755 A8MX80 341 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 SNRPB2P08579 225 aaKnown RBP11.65□□□□□ -0.54
VCL-202ENST00000372755 HECTD3Q5T447 861 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 SLC41A1Q8IVJ1 513 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 ZC3H7AQ8IWR0 971 aaKnown RBP11.65□□□□□ -0.54
VCL-202ENST00000372755 KBTBD8Q8NFY9 601 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 AENQ8WTP8 325 aaKnown RBP11.65□□□□□ -0.54
VCL-202ENST00000372755 COL26A1Q96A83 441 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 PNMA5Q96PV4 448 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 BTBD9Q96Q07 612 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 IL25Q9H293 177 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 EXO5Q9H790 373 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 ATP13A3Q9H7F0 1226 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.65□□□□□ -0.541e-9■■■□□ 16
VCL-202ENST00000372755 OR10H1Q9Y4A9 318 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 SETBP1Q9Y6X0 1596 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 ADCY6O43306 1168 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 EPORP19235 508 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms