RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 PLOD1Q02809 727 aaPredicted RBP15.02□□□□□ -0.01
COL9A2-202ENST00000372748 NSUN2Q08J23 767 aaKnown RBP eCLIP15.02□□□□□ -0.01
COL9A2-202ENST00000372748 PDAP1Q13442 181 aaKnown RBP15.02□□□□□ -0.01
COL9A2-202ENST00000372748 DGKDQ16760 1214 aa15.02□□□□□ -0.01
COL9A2-202ENST00000372748 PKDCCQ504Y2 493 aa15.02□□□□□ -0.01
COL9A2-202ENST00000372748 ZNF484Q5JVG2 852 aa15.02□□□□□ -0.01
COL9A2-202ENST00000372748 CARM1Q86X55 608 aa15.02□□□□□ -0.01
COL9A2-202ENST00000372748 SULF1Q8IWU6 871 aa15.02□□□□□ -0.01
COL9A2-202ENST00000372748 LSMEM2Q8N112 164 aa15.02□□□□□ -0.01
COL9A2-202ENST00000372748 TMEM151AQ8N4L1 468 aa15.02□□□□□ -0.01
COL9A2-202ENST00000372748 FAM47BQ8NA70 645 aa15.02□□□□□ -0.01
COL9A2-202ENST00000372748 ISL2Q96A47 359 aa15.02□□□□□ -0.01
COL9A2-202ENST00000372748 NFKBIZQ9BYH8 718 aa15.02□□□□□ -0.01
COL9A2-202ENST00000372748 EIF2B3Q9NR50 452 aaKnown RBP15.02□□□□□ -0.01
COL9A2-202ENST00000372748 ADAM28Q9UKQ2 775 aa15.02□□□□□ -0.01
COL9A2-202ENST00000372748 PADI4Q9UM07 663 aa15.02□□□□□ -0.01
COL9A2-202ENST00000372748 H3BNH8 94 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 TRIM38O00635 465 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 TADA2AO75478 443 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 TXNL4AP83876 142 aaKnown RBP15.01□□□□□ -0.01
COL9A2-202ENST00000372748 PRKAA1Q13131 559 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 SETD3Q86TU7 594 aaPredicted RBP15.01□□□□□ -0.01
COL9A2-202ENST00000372748 KCNMB4Q86W47 210 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 CLVS1Q8IUQ0 354 aaPredicted RBP15.01□□□□□ -0.01
COL9A2-202ENST00000372748 HERC6Q8IVU3 1022 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 ALDH16A1Q8IZ83 802 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 ASB9Q96DX5 294 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 SYT17Q9BSW7 474 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 UBP1Q9NZI7 540 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 TLK1Q9UKI8 766 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 RUVBL2Q9Y230 463 aaKnown RBP15.01□□□□□ -0.01
COL9A2-202ENST00000372748 PCDHGA7Q9Y5G6 932 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 CITO14578 2027 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 BPTFQ12830 3046 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 CYP2C8P10632 490 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 ALDH3B2P48448 385 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 TRIM25Q14258 630 aaKnown RBP15.01□□□□□ -0.01
COL9A2-202ENST00000372748 ZYG11AQ6WRX3 759 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 GPC2Q8N158 579 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 LPGAT1Q92604 370 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 FAM149B1Q96BN6 582 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 DCPSQ96C86 337 aaKnown RBP15.01□□□□□ -0.01
COL9A2-202ENST00000372748 MAML3Q96JK9 1138 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 BFARQ9NZS9 450 aa15.01□□□□□ -0.01
COL9A2-202ENST00000372748 GMPR2Q9P2T1 348 aaKnown RBP15.01□□□□□ -0.01
COL9A2-202ENST00000372748 HACD1B0YJ81 288 aa15□□□□□ -0.01
COL9A2-202ENST00000372748 TOMM70O94826 608 aa15□□□□□ -0.01
COL9A2-202ENST00000372748 ADCYAP1R1P41586 468 aa15□□□□□ -0.01
COL9A2-202ENST00000372748 PTPN9P43378 593 aa15□□□□□ -0.01
COL9A2-202ENST00000372748 CTBSQ01459 385 aa15□□□□□ -0.01
COL9A2-202ENST00000372748 FSTL5Q8N475 847 aaPredicted RBP15□□□□□ -0.01
COL9A2-202ENST00000372748 SLCO4A1Q96BD0 722 aa15□□□□□ -0.01
COL9A2-202ENST00000372748 RANBP9Q96S59 729 aa15□□□□□ -0.01
COL9A2-202ENST00000372748 C11orf84Q9BUA3 381 aaPredicted RBP15□□□□□ -0.01
COL9A2-202ENST00000372748 OSBPL11Q9BXB4 747 aa15□□□□□ -0.01
COL9A2-202ENST00000372748 KIAA1257Q9ULG3 409 aa15□□□□□ -0.01
COL9A2-202ENST00000372748 PRORSD1PA6NEY8 169 aa15□□□□□ -0.01
COL9A2-202ENST00000372748 ZNF487B1APH4 448 aa15□□□□□ -0.01
COL9A2-202ENST00000372748 TIPRLO75663 272 aa15□□□□□ -0.01
COL9A2-202ENST00000372748 SEC24DO94855 1032 aaPredicted RBP15□□□□□ -0.01
COL9A2-202ENST00000372748 GNAO1P09471 354 aa15□□□□□ -0.01
COL9A2-202ENST00000372748 HNRNPLP14866 589 aaKnown RBP eCLIP15□□□□□ -0.01
COL9A2-202ENST00000372748 IREB2P48200 963 aaKnown RBP15□□□□□ -0.01
COL9A2-202ENST00000372748 USP10Q14694 798 aaKnown RBP15□□□□□ -0.01
COL9A2-202ENST00000372748 PITRM1Q5JRX3 1037 aa15□□□□□ -0.01
COL9A2-202ENST00000372748 TMEM135Q86UB9 458 aa15□□□□□ -0.01
COL9A2-202ENST00000372748 BBS5Q8N3I7 341 aa15□□□□□ -0.01
COL9A2-202ENST00000372748 FIBCD1Q8N539 461 aa15□□□□□ -0.01
COL9A2-202ENST00000372748 CENPIQ92674 756 aaPredicted RBP15□□□□□ -0.01
COL9A2-202ENST00000372748 SLC39A3Q9BRY0 314 aa15□□□□□ -0.01
COL9A2-202ENST00000372748 EIF2AQ9BY44 585 aaKnown RBP15□□□□□ -0.01
COL9A2-202ENST00000372748 FAM49AQ9H0Q0 323 aaPredicted RBP15□□□□□ -0.01
COL9A2-202ENST00000372748 TRPC7Q9HCX4 862 aa15□□□□□ -0.01
COL9A2-202ENST00000372748 CCDC167Q9P0B6 97 aa15□□□□□ -0.01
COL9A2-202ENST00000372748 XPR1Q9UBH6 696 aa15□□□□□ -0.01
COL9A2-202ENST00000372748 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.99□□□□□ -0.01
COL9A2-202ENST00000372748 DLX3O60479 287 aa14.99□□□□□ -0.01
COL9A2-202ENST00000372748 LMO2P25791 158 aa14.99□□□□□ -0.01
COL9A2-202ENST00000372748 ETFBP38117 255 aa14.99□□□□□ -0.01
COL9A2-202ENST00000372748 NAA20P61599 178 aa14.99□□□□□ -0.01
COL9A2-202ENST00000372748 HMBOX1Q6NT76 420 aa14.99□□□□□ -0.01
COL9A2-202ENST00000372748 ZBTB46Q86UZ6 589 aa14.99□□□□□ -0.01
COL9A2-202ENST00000372748 ERO1BQ86YB8 467 aa14.99□□□□□ -0.01
COL9A2-202ENST00000372748 LINC01465Q8N7H1 131 aa14.99□□□□□ -0.01
COL9A2-202ENST00000372748 PNPLA3Q9NST1 481 aa14.99□□□□□ -0.01
COL9A2-202ENST00000372748 CNOT11Q9UKZ1 510 aaKnown RBP14.99□□□□□ -0.01
COL9A2-202ENST00000372748 CDC14AQ9UNH5 594 aa14.99□□□□□ -0.01
COL9A2-202ENST00000372748 HTRA2O43464 458 aaPredicted RBP14.99□□□□□ -0.01
COL9A2-202ENST00000372748 H2AFYO75367 372 aaKnown RBP14.99□□□□□ -0.01
COL9A2-202ENST00000372748 MT-CO1P00395 513 aa14.99□□□□□ -0.01
COL9A2-202ENST00000372748 PSMD7P51665 324 aa14.99□□□□□ -0.01
COL9A2-202ENST00000372748 RHDQ02161 417 aa14.99□□□□□ -0.01
COL9A2-202ENST00000372748 ZNF618Q5T7W0 954 aa14.99□□□□□ -0.01
COL9A2-202ENST00000372748 ELMSAN1Q6PJG2 1045 aa14.99□□□□□ -0.01
COL9A2-202ENST00000372748 ZBTB49Q6ZSB9 765 aa14.99□□□□□ -0.01
COL9A2-202ENST00000372748 RPS27LQ71UM5 84 aaKnown RBP14.99□□□□□ -0.01
COL9A2-202ENST00000372748 CNTD1Q8N815 330 aa14.99□□□□□ -0.01
COL9A2-202ENST00000372748 SMYD1Q8NB12 490 aa14.99□□□□□ -0.01
COL9A2-202ENST00000372748 RNF139Q8WU17 664 aa14.99□□□□□ -0.01
COL9A2-202ENST00000372748 TSNARE1Q96NA8 513 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms