RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 RPS2P15880 293 aaKnown RBP15.44■□□□□ 0.06
COL5A1-201ENST00000371817 PROSER3Q2NL68 480 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 GJB7Q6PEY0 223 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 TEX47Q8TBZ9 253 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 SLC47A1Q96FL8 570 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 AP2A2O94973 939 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 MTX3Q5HYI7 312 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 FAM76BQ5HYJ3 339 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 PPP1R15BQ5SWA1 713 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 GCNT7Q6ZNI0 430 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 TSEN2Q8NCE0 465 aaKnown RBP15.43■□□□□ 0.06
COL5A1-201ENST00000371817 LRRN4CLQ8ND94 238 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 ZNF512Q96ME7 567 aaPredicted RBP15.43■□□□□ 0.06
COL5A1-201ENST00000371817 TAS2R13Q9NYV9 303 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 PRMT3O60678 531 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 HMBSP08397 361 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 CDKL1Q00532 357 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 HDDC3Q8N4P3 179 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 SNIP1Q8TAD8 396 aaKnown RBP15.43■□□□□ 0.06
COL5A1-201ENST00000371817 LEF1Q9UJU2 399 aaPredicted RBP15.43■□□□□ 0.06
COL5A1-201ENST00000371817 TMEM5Q9Y2B1 443 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 ZMYM2Q9UBW7 1377 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 CPNE3O75131 537 aaKnown RBP15.43■□□□□ 0.06
COL5A1-201ENST00000371817 ACADVLP49748 655 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 OR52K2Q8NGK3 314 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 BBS4Q96RK4 519 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 PSMD13Q9UNM6 376 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 KBTBD13C9JR72 458 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 RBMXL2O75526 392 aaKnown RBP15.43■□□□□ 0.06
COL5A1-201ENST00000371817 VMACQ2NL98 169 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 ADCY4Q8NFM4 1077 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 NKIRAS2Q9NYR9 191 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 FADS3Q9Y5Q0 445 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 CRATP43155 626 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 NPTX2P47972 431 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 EIF5AP63241 154 aaKnown RBP15.43■□□□□ 0.06
COL5A1-201ENST00000371817 CDC42EP1Q00587 391 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 TMPRSS11AQ6ZMR5 421 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 PIGKQ92643 395 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 MARK4Q96L34 752 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 SPATA5L1Q9BVQ7 753 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 S100A14Q9HCY8 104 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 ULK1O75385 1050 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 CYP2A7P20853 494 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 MAPKAPK3Q16644 382 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 MILR1Q7Z6M3 343 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 SHROOM2Q13796 1616 aa15.43■□□□□ 0.06
COL5A1-201ENST00000371817 CMTR2Q8IYT2 770 aaKnown RBP15.42■□□□□ 0.06
COL5A1-201ENST00000371817 HDAC7Q8WUI4 952 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 TRIM2Q9C040 744 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 LRRC4BQ9NT99 713 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 RAB23Q9ULC3 237 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 OR2AT4A6NND4 320 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 M0QYT0 321 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 STK25O00506 426 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 BMP7P18075 431 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 AFF1P51825 1210 aaKnown RBP15.42■□□□□ 0.06
COL5A1-201ENST00000371817 COLGALT1Q8NBJ5 622 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 ABCB9Q9NP78 766 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 WDR27A2RRH5 827 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 CYP4F8P98187 520 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 RHEBQ15382 184 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 ZNF521Q96K83 1311 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 TBC1D13Q9NVG8 400 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 ZMYM5Q9UJ78 669 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 CHURC1-FNTBB4DL54 471 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 C2CD2LO14523 706 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 TPP1O14773 563 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 PHKG2P15735 406 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 DDIT4Q9NX09 232 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 ZMPSTE24O75844 475 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 OR7A10O76100 309 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 ECT2LQ008S8 904 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 PTAR1Q7Z6K3 402 aaPredicted RBP15.42■□□□□ 0.06
COL5A1-201ENST00000371817 SLC34A3Q8N130 599 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 MPP5Q8N3R9 675 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 ACTL9Q8TC94 416 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 RIOK2Q9BVS4 552 aaKnown RBP15.42■□□□□ 0.06
COL5A1-201ENST00000371817 SNAPC5O75971 98 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 PIGNO95427 931 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 CYP1A1P04798 512 aaPredicted RBP15.42■□□□□ 0.06
COL5A1-201ENST00000371817 PLK1P53350 603 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 SPIBQ01892 262 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 ZBTB6Q15916 424 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 DNAJA4Q8WW22 397 aaPredicted RBP15.42■□□□□ 0.06
COL5A1-201ENST00000371817 DPY19L2Q6NUT2 758 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 SLC38A7Q9NVC3 462 aa15.42■□□□□ 0.06
COL5A1-201ENST00000371817 LRRC14BA6NHZ5 514 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 PLIN3O60664 434 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 ITGA4P13612 1032 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 HAGHLQ6PII5 290 aaPredicted RBP15.41■□□□□ 0.06
COL5A1-201ENST00000371817 PNPT1Q8TCS8 783 aaKnown RBP15.41■□□□□ 0.06
COL5A1-201ENST00000371817 RTKNQ9BST9 563 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 SYNDIG1Q9H7V2 258 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 NINJ2Q9NZG7 142 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 GNEQ9Y223 722 aaKnown RBP15.41■□□□□ 0.06
COL5A1-201ENST00000371817 RBM7Q9Y580 266 aaKnown RBP15.41■□□□□ 0.06
COL5A1-201ENST00000371817 ADGRL2O95490 1459 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 ZNF668Q96K58 619 aaPredicted RBP15.41■□□□□ 0.06
COL5A1-201ENST00000371817 KCNIP3Q9Y2W7 256 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms