RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 ACTRT2Q8TDY3 377 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 B3GNT5Q9BYG0 378 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 SLC7A5P2Q9GIP4 190 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 MIEF1Q9NQG6 463 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 FBXO6Q9NRD1 293 aaPredicted RBP11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 SYBUQ9NX95 663 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 PLLPQ9Y342 182 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 GPR25O00155 361 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 ZBTB14O43829 449 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 FGF1P05230 155 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 CYP2A6P11509 494 aaPredicted RBP11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 CKBP12277 381 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 UNGP13051 313 aaPredicted RBP11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 CRHR1P34998 444 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 RXRGP48443 463 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 PKNOX1P55347 436 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 MRPS15P82914 257 aaKnown RBP11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 TRIM60Q495X7 471 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 RNASEH2BQ5TBB1 312 aaKnown RBP11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 ADGRD1Q6QNK2 874 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 KCTD4Q8WVF5 259 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 PYDC1Q8WXC3 89 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 FCRL2Q96LA5 508 aaPredicted RBP11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 RRAGCQ9HB90 399 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 XPR1Q9UBH6 696 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 LZTS1Q9Y250 596 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 CLDN5O00501 218 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 PQBP1O60828 265 aaKnown RBP11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 ENTPD5O75356 428 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 PGK1P00558 417 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 S100A3P33764 101 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 PTDSS1P48651 473 aaKnown RBP11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 ATP6V0D1P61421 351 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 BOP1Q14137 746 aaKnown RBP11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 QPCTQ16769 361 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 LACTB2Q53H82 288 aaPredicted RBP11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 OTUD3Q5T2D3 398 aaPredicted RBP11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 AFTPHQ6ULP2 937 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 CAMK1DQ8IU85 385 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 SYTL1Q8IYJ3 562 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 FIG4Q92562 907 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 RNF145Q96MT1 663 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 COPS7BQ9H9Q2 264 aaPredicted RBP11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 COPG2Q9UBF2 871 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 ZNF180Q9UJW8 692 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 PRPF19Q9UMS4 504 aaKnown RBP11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 IFRD1O00458 451 aaPredicted RBP11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 CNOT3O75175 753 aaKnown RBP11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 COL6A2P12110 1019 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 ADSSP30520 456 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 WNT3AP56704 352 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 FBXW4P57775 412 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 GBE1Q04446 702 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 RIPK1Q13546 671 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 AAGABQ6PD74 315 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 C11orf96Q7Z7L8 435 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 METTL3Q86U44 580 aaKnown RBP11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 STK32CQ86UX6 486 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 SETD9Q8NE22 299 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 PDZD7Q9H5P4 517 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 LIMD1Q9UGP4 676 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 ENOPH1Q9UHY7 261 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 ZNF214Q9UL59 606 aaPredicted RBP11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 A0A087WXM4 84 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 OR6C75A6NL08 312 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 SPTLC1O15269 473 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 TGDSO95455 350 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 C2P06681 752 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 EPB42P16452 691 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 HTR7P34969 479 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 KRT20P35900 424 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 CDK18Q07002 472 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 EPS8Q12929 822 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 IL27RAQ6UWB1 636 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 USP45Q70EL2 814 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 MOB2Q70IA6 237 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 ZDHHC13Q8IUH4 622 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 SLC44A2Q8IWA5 706 aaPredicted RBP11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 TRIM48Q8IWZ4 208 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 TMEM132CQ8N3T6 1108 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 PCDH20Q8N6Y1 951 aaKnown RBP11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 NMD3Q96D46 503 aaKnown RBP11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 GLOD4Q9HC38 313 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 SH3BP4Q9P0V3 963 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 SLC17A7Q9P2U7 560 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 MAPRE3Q9UPY8 281 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 ADAMTS3O15072 1205 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 STAU1O95793 577 aaKnown RBP11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 CATP04040 527 aaKnown RBP11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 MMP3P08254 477 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 ANXA5P08758 320 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 PCNAP12004 261 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 ARL4DP49703 201 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 TGM3Q08188 693 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 STARD3Q14849 445 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 TRIM16LQ309B1 348 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 REPS1Q96D71 796 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 ZMAT2Q96NC0 199 aaKnown RBP11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 PRRG3Q9BZD7 231 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 PIF1Q9H611 641 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms