RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 TMEM109Q9BVC6 243 aa9□□□□□ -0.97
SNX27-201ENST00000368838 TKTL2Q9H0I9 626 aa9□□□□□ -0.97
SNX27-201ENST00000368838 RAB6CQ9H0N0 254 aa9□□□□□ -0.97
SNX27-201ENST00000368838 CATSPERBQ9H7T0 1116 aa9□□□□□ -0.97
SNX27-201ENST00000368838 KIF9Q9HAQ2 790 aa9□□□□□ -0.97
SNX27-201ENST00000368838 ANLNQ9NQW6 1124 aa9□□□□□ -0.97
SNX27-201ENST00000368838 OSER1Q9NX31 292 aa9□□□□□ -0.97
SNX27-201ENST00000368838 SMPD4Q9NXE4 827 aa9□□□□□ -0.97
SNX27-201ENST00000368838 DTLQ9NZJ0 730 aa9□□□□□ -0.97
SNX27-201ENST00000368838 PAK5Q9P286 719 aa9□□□□□ -0.97
SNX27-201ENST00000368838 OR12D3Q9UGF7 316 aa9□□□□□ -0.97
SNX27-201ENST00000368838 NFU1Q9UMS0 254 aa9□□□□□ -0.97
SNX27-201ENST00000368838 NEU3Q9UQ49 428 aa9□□□□□ -0.97
SNX27-201ENST00000368838 ZSCAN5CA6NGD5 496 aaPredicted RBP8.99□□□□□ -0.97
SNX27-201ENST00000368838 E7ESA3 106 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 EEF2KO00418 725 aaKnown RBP8.99□□□□□ -0.97
SNX27-201ENST00000368838 SLC30A4O14863 429 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 PPP1R12AO14974 1030 aaPredicted RBP8.99□□□□□ -0.97
SNX27-201ENST00000368838 CACNG3O60359 315 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 TLR5O60602 858 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 LRIG2O94898 1065 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 OAS1P00973 400 aaKnown RBP8.99□□□□□ -0.97
SNX27-201ENST00000368838 TCF3P15923 654 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 PECAM1P16284 738 aaPredicted RBP8.99□□□□□ -0.97
SNX27-201ENST00000368838 TSHRP16473 764 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 GOT1P17174 413 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 ERCC2P18074 760 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 SDHBP21912 280 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 CNR2P34972 360 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 ATP5C1P36542 298 aaKnown RBP8.99□□□□□ -0.97
SNX27-201ENST00000368838 KCNJ1P48048 391 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 NDST2P52849 883 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 EIF3BP55884 814 aaKnown RBP8.99□□□□□ -0.97
SNX27-201ENST00000368838 TBX4P57082 545 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 EIF3EP60228 445 aaKnown RBP8.99□□□□□ -0.97
SNX27-201ENST00000368838 ZXDBP98169 803 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 PPIDQ08752 370 aaKnown RBP8.99□□□□□ -0.97
SNX27-201ENST00000368838 GALNT2Q10471 571 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 USP4Q13107 963 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 MMRN1Q13201 1228 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 NME3Q13232 169 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 PDGFRLQ15198 375 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 RASA2Q15283 850 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 C2orf27AQ580R0 203 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 HECTD3Q5T447 861 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 CFAP58Q5T655 872 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 LRIG3Q6UXM1 1119 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 TRMT10CQ7L0Y3 403 aaKnown RBP8.99□□□□□ -0.97
SNX27-201ENST00000368838 TMC3Q7Z5M5 1100 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 UMODL1-AS1Q8N2C9 162 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 CCDC33Q8N5R6 958 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 PLPP7Q8NBV4 271 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 MCUQ8NE86 351 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 OSCP1Q8WVF1 389 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 ATG4AQ8WYN0 398 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 EDEM1Q92611 657 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 PPP1R2P1Q96PQ5 205 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 PRMT1Q99873 361 aaKnown RBP8.99□□□□□ -0.97
SNX27-201ENST00000368838 TPSD1Q9BZJ3 242 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 KLC2Q9H0B6 622 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 MED4Q9NPJ6 270 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 TRPM5Q9NZQ8 1165 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 MARCH2Q9P0N8 246 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 GMIPQ9P107 970 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 DNMT3LQ9UJW3 386 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 TPX2Q9ULW0 747 aaKnown RBP8.99□□□□□ -0.97
SNX27-201ENST00000368838 PCDHB9Q9Y5E1 797 aa8.99□□□□□ -0.97
SNX27-201ENST00000368838 USP24Q9UPU5 2620 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 TP53BP1Q12888 1972 aaPredicted RBP8.98□□□□□ -0.97
SNX27-201ENST00000368838 FAM170AA1A519 330 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 ERI2A8K979 691 aaKnown RBP8.98□□□□□ -0.97
SNX27-201ENST00000368838 LEFTY2O00292 366 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 GFRA2O00451 464 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 OPHN1O60890 802 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 PAGE1O75459 146 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 TCEA3O75764 348 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 APOEP02649 317 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 RHOQP17081 205 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 DRD1P21728 446 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 GJC1P36383 396 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 SLC6A11P48066 632 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 MAPKAPK2P49137 400 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 YBEYP58557 167 aaPredicted RBP8.98□□□□□ -0.97
SNX27-201ENST00000368838 TPI1P60174 286 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 SLC7A9P82251 487 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 MESP2Q0VG99 397 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 SLC10A2Q12908 348 aaPredicted RBP8.98□□□□□ -0.97
SNX27-201ENST00000368838 GPS2Q13227 327 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 DMC1Q14565 340 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 PPP6R3Q5H9R7 873 aaPredicted RBP8.98□□□□□ -0.97
SNX27-201ENST00000368838 RNASEH2BQ5TBB1 312 aaKnown RBP8.98□□□□□ -0.97
SNX27-201ENST00000368838 KAZNQ674X7 775 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 RNF43Q68DV7 783 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 IL31Q6EBC2 164 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 PPP1R21Q6ZMI0 780 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 ADAT2Q7Z6V5 191 aaKnown RBP8.98□□□□□ -0.97
SNX27-201ENST00000368838 NLRP14Q86W24 1093 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 ANKMY2Q8IV38 441 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 FAM217AQ8IXS0 508 aa8.98□□□□□ -0.97
SNX27-201ENST00000368838 ZCCHC9Q8N567 271 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms