RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 NIPBLQ6KC79 2804 aaeCLIP6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 HIVEP1P15822 2718 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 TRBV23OR9-2A0A075B6M9 112 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 DENND3A2RUS2 1198 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 CCT8L1PA6NM43 557 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 PATE3B3GLJ2 98 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 AURKAO14965 403 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 INPPL1O15357 1258 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 SLC16A4O15374 487 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 CDH16O75309 829 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 RASSF9O75901 435 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 SUN1O94901 812 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 PROSCO94903 275 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 TTC4O95801 387 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 CALB1P05937 261 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 RNASE1P07998 156 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 PYGMP11217 842 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 RAC2P15153 192 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 DRD4P21917 467 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 ITPKBP27987 946 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 HOXC12P31275 282 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 HNRNPH1P31943 449 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 PPM1AP35813 382 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 SKIV2L2P42285 1042 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 NAMPTP43490 491 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 NSFP46459 744 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 RPL21P46778 160 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 CCR3P51677 355 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 EFNA5P52803 228 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 BCAR1P56945 870 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 DLG4P78352 724 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 SIM1P81133 766 aaPredicted RBP6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 CCDC15Q0P6D6 951 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 IFT88Q13099 833 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 SLC29A2Q14542 456 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 ZACNQ401N2 412 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 RNF187Q5TA31 235 aaPredicted RBP6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 EEF1DP3Q658K8 133 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 TAF2Q6P1X5 1199 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 RHBDF2Q6PJF5 856 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 CYP2R1Q6VVX0 501 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 ZNF852Q6ZMS4 543 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 Q6ZS52 159 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 SLC24A5Q71RS6 500 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 WDR5BQ86VZ2 330 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 ZNF227Q86WZ6 799 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 MARCH9Q86YJ5 346 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 TDRPQ86YL5 185 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 KSR1Q8IVT5 923 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 ARHGEF19Q8IW93 802 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 MCOLN2Q8IZK6 566 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 ABI1Q8IZP0 508 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 NAT16Q8N8M0 369 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 PDZD8Q8NEN9 1154 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 PSPC1Q8WXF1 523 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 POMGNT1Q8WZA1 660 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 CCT6BQ92526 530 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 CCDC114Q96M63 670 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 ANKRD27Q96NW4 1050 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 FCRL3Q96P31 734 aaPredicted RBP6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 FNBP1Q96RU3 617 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 MPHOSPH6Q99547 160 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 CELF4Q9BZC1 486 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 IMPG2Q9BZV3 1241 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 ADAMTS10Q9H324 1103 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 EPB41L4BQ9H329 900 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 VPS45Q9NRW7 570 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 KLC4Q9NSK0 619 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 PARVAQ9NVD7 372 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 DDX56Q9NY93 547 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 TAS2R14Q9NYV8 317 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 TNFRSF10DQ9UBN6 386 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 ZNF281Q9Y2X9 895 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 SNX24Q9Y343 169 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 BACE2Q9Y5Z0 518 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 SQORQ9Y6N5 450 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 NOTCH4Q99466 2003 aa6.7□□□□□ -1.34
ECHDC1-202ENST00000368289 F8P00451 2351 aa6.69□□□□□ -1.34
ECHDC1-202ENST00000368289 HNRNPCL1O60812 293 aaKnown RBP6.69□□□□□ -1.34
ECHDC1-202ENST00000368289 TJP3O95049 919 aa6.69□□□□□ -1.34
ECHDC1-202ENST00000368289 MMEP08473 750 aa6.69□□□□□ -1.34
ECHDC1-202ENST00000368289 SPATA31D3P0C874 917 aa6.69□□□□□ -1.34
ECHDC1-202ENST00000368289 GNAT1P11488 350 aa6.69□□□□□ -1.34
ECHDC1-202ENST00000368289 ATF2P15336 505 aa6.69□□□□□ -1.34
ECHDC1-202ENST00000368289 CHN1P15882 459 aa6.69□□□□□ -1.34
ECHDC1-202ENST00000368289 ADSSP30520 456 aa6.69□□□□□ -1.34
ECHDC1-202ENST00000368289 CA8P35219 290 aa6.69□□□□□ -1.34
ECHDC1-202ENST00000368289 FLT3P36888 993 aa6.69□□□□□ -1.34
ECHDC1-202ENST00000368289 KIR2DL1P43626 348 aaPredicted RBP6.69□□□□□ -1.34
ECHDC1-202ENST00000368289 KIR2DL2P43627 348 aaPredicted RBP6.69□□□□□ -1.34
ECHDC1-202ENST00000368289 PXNP49023 591 aaPredicted RBP6.69□□□□□ -1.34
ECHDC1-202ENST00000368289 SEPHS1P49903 392 aa6.69□□□□□ -1.34
ECHDC1-202ENST00000368289 GTF2A1P52655 376 aaPredicted RBP6.69□□□□□ -1.34
ECHDC1-202ENST00000368289 SEC24CP53992 1094 aa6.69□□□□□ -1.34
ECHDC1-202ENST00000368289 MRPS25P82663 173 aaKnown RBP6.69□□□□□ -1.34
ECHDC1-202ENST00000368289 CFHR1Q03591 330 aa6.69□□□□□ -1.34
ECHDC1-202ENST00000368289 PIGHQ14442 188 aaPredicted RBP6.69□□□□□ -1.34
ECHDC1-202ENST00000368289 SIX1Q15475 284 aaPredicted RBP6.69□□□□□ -1.34
ECHDC1-202ENST00000368289 TRADDQ15628 312 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms