RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 PPARGP37231 505 aaPredicted RBP12.51□□□□□ -0.41
PTPN7-202ENST00000367279 CSE1LP55060 971 aaKnown RBP12.51□□□□□ -0.41
PTPN7-202ENST00000367279 NOMO2Q5JPE7 1267 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 ZNF470Q6ECI4 717 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 GK5Q6ZS86 529 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 ARPINQ7Z6K5 226 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 TOP6BLQ8N6T0 577 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 TEKT5Q96M29 485 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 SLC2A13Q96QE2 648 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 SPATA16Q9BXB7 569 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 ABHD16BQ9H3Z7 469 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 TRHDEQ9UKU6 1024 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 PLXNA1Q9UIW2 1896 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 MAGEB16A2A368 324 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 H3BNX3 289 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 DLX3O60479 287 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 BDNFP23560 247 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 CLCNKBP51801 687 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 CHN2P52757 468 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 BTKQ06187 659 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 ADGRG6Q86SQ4 1221 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 KBTBD6Q86V97 674 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 CEP97Q8IW35 865 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 SMG8Q8ND04 991 aaKnown RBP12.5□□□□□ -0.41
PTPN7-202ENST00000367279 TBL1YQ9BQ87 522 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 DRC3Q9H069 523 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 SEMA6AQ9H2E6 1030 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 RHOJQ9H4E5 214 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 POMKQ9H5K3 350 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 PSMD13Q9UNM6 376 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 A0A1B0GVG6 124 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 GRID2O43424 1007 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 SLC35E2BP0CK96 405 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 GLDCP23378 1020 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 CHRNA4P43681 627 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 RPL34P49207 117 aaKnown RBP12.5□□□□□ -0.41
PTPN7-202ENST00000367279 UBXN11Q5T124 520 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 CLEC14AQ86T13 490 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 TAC4Q86UU9 113 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 CNTD1Q8N815 330 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 PPHLN1Q8NEY8 458 aaKnown RBP12.5□□□□□ -0.41
PTPN7-202ENST00000367279 NPLOC4Q8TAT6 608 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 NT5C3BQ969T7 300 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 PHF21BQ96EK2 531 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 STK39Q9UEW8 545 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 SMIM35A0A1B0GVV1 85 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 BTBD19C9JJ37 291 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 PTGESO14684 152 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 MTSS1O43312 755 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 H2AFYO75367 372 aaKnown RBP12.5□□□□□ -0.41
PTPN7-202ENST00000367279 FBXO21O94952 628 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 APOA4P06727 396 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 FGFR3P22607 806 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 MS4A2Q01362 244 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 CACNB2Q08289 660 aaPredicted RBP12.5□□□□□ -0.41
PTPN7-202ENST00000367279 METTL21CQ5VZV1 264 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 RP9Q8TA86 221 aaKnown RBP12.5□□□□□ -0.41
PTPN7-202ENST00000367279 EMID1Q96A84 441 aaPredicted RBP12.5□□□□□ -0.41
PTPN7-202ENST00000367279 HDAC11Q96DB2 347 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 GPR22Q99680 433 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 KATNBL1Q9H079 304 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 EFCAB1Q9HAE3 211 aa12.5□□□□□ -0.41
PTPN7-202ENST00000367279 ERI2A8K979 691 aaKnown RBP12.49□□□□□ -0.41
PTPN7-202ENST00000367279 GPC4O75487 556 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 CABYRO75952 493 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 GABRB3P28472 473 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 GRIA2P42262 883 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 MAGEA12P43365 314 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 CEACAM7Q14002 265 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 TLR1Q15399 786 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 C6orf52Q5T4I8 152 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 KCTD11Q693B1 232 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 ARHGAP18Q8N392 663 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 ZMIZ2Q8NF64 920 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 KCTD13Q8WZ19 329 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 PAAF1Q9BRP4 392 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 Q9H521 79 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 KCNU1A8MYU2 1149 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 CCL22O00626 93 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 MSI1O43347 362 aaKnown RBP12.49□□□□□ -0.41
PTPN7-202ENST00000367279 CSPG5O95196 566 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 KCNE1P15382 129 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 HDCP19113 662 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 ME2P23368 584 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 PRDX6P30041 224 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 RAB10P61026 200 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 CDC42EP1Q00587 391 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 GALNT2Q10471 571 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 PDAP1Q13442 181 aaKnown RBP12.49□□□□□ -0.41
PTPN7-202ENST00000367279 PTK2BQ14289 1009 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 GK3PQ14409 553 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 NRF1Q16656 503 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 TLK2Q86UE8 772 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 RYBPQ8N488 228 aaPredicted RBP12.49□□□□□ -0.41
PTPN7-202ENST00000367279 TRPV6Q9H1D0 765 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 PRDM16Q9HAZ2 1276 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 VCX3AQ9NNX9 186 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 CCDC167Q9P0B6 97 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 SFMBT1Q9UHJ3 866 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 PCDHGB4Q9UN71 923 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms