RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 CRY1Q16526 586 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 OR2L5Q8NG80 312 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 HDAC7Q8WUI4 952 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 ZMYM2Q9UBW7 1377 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 CROCCQ5TZA2 2017 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 SNAP23O00161 211 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 CCNYL3P0C7X3 344 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 ZNF470Q6ECI4 717 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 MAP3K14Q99558 947 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 RIT2Q99578 217 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 LEF1Q9UJU2 399 aaPredicted RBP9.4□□□□□ -0.9
VPS13A-203ENST00000360280 SNX6Q9UNH7 406 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 RPL26L1Q9UNX3 145 aaKnown RBP9.4□□□□□ -0.9
VPS13A-203ENST00000360280 PRELID1Q9Y255 219 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 CHD4Q14839 1912 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 CCNE2O96020 404 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 FGFR1P11362 822 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 PLD1Q13393 1074 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 TP53INP1Q96A56 240 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 PI4K2AQ9BTU6 479 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 PRMT3O60678 531 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 HUNKP57058 714 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 CYP2A13Q16696 494 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 UBE2Q1Q7Z7E8 422 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 ATCAYQ86WG3 371 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 ADGRF2Q8IZF7 708 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 FATE1Q969F0 183 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 LRMDAQ9H2I8 198 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 CHMP1AQ9HD42 196 aaPredicted RBP9.4□□□□□ -0.9
VPS13A-203ENST00000360280 MAGI2Q86UL8 1455 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 LTFP02788 710 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 ANPEPP15144 967 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 AMHR2Q16671 573 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 TMPRSS11AQ6ZMR5 421 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 SLCO6A1Q86UG4 719 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 GPSM1Q86YR5 675 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 ZNF548Q8NEK5 533 aaPredicted RBP9.4□□□□□ -0.91
VPS13A-203ENST00000360280 RAB23Q9ULC3 237 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 CLEC4AQ9UMR7 237 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 RBAK-RBAKDNI3L0D1 243 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 CST1P01037 141 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 ACSM2AQ08AH3 577 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 BMT2Q1RMZ1 405 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 ACSM2BQ68CK6 577 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 C10orf107Q8IVU9 208 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 RNF148Q8N7C7 305 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 BTBD9Q96Q07 612 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 PCDHA3Q9Y5H8 950 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 UNC5CO95185 931 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 TMEM62Q0P6H9 643 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 MAPKAPK3Q16644 382 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 COLGALT1Q8NBJ5 622 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 FBXO30Q8TB52 745 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 SLC4A9Q96Q91 983 aa9.4□□□□□ -0.91
VPS13A-203ENST00000360280 DPYSQ14117 519 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 FIGNQ5HY92 759 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 COLGALT2Q8IYK4 626 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 LRRC20Q8TCA0 184 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 ZNF354BQ96LW1 612 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 PRDM16Q9HAZ2 1276 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 GMIPQ9P107 970 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 ZMYM5Q9UJ78 669 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 SAMD4AQ9UPU9 718 aaKnown RBP9.39□□□□□ -0.91
VPS13A-203ENST00000360280 FAM172BPA6NC97 362 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 VDRP11473 427 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 PDX1P52945 283 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 MCCD1P59942 119 aaPredicted RBP9.39□□□□□ -0.91
VPS13A-203ENST00000360280 MYL6P60660 151 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 MBTD1Q05BQ5 628 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 SLC44A5Q8NCS7 719 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 KCNN2Q9H2S1 579 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 MUC13Q9H3R2 512 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 SRRM3A6NNA2 597 aaPredicted RBP9.39□□□□□ -0.91
VPS13A-203ENST00000360280 CCR1P32246 355 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 ELF3P78545 371 aaPredicted RBP9.39□□□□□ -0.91
VPS13A-203ENST00000360280 RBM43Q6ZSC3 357 aaKnown RBP9.39□□□□□ -0.91
VPS13A-203ENST00000360280 UGT2B11O75310 529 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 OR7A10O76100 309 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 NPTXRO95502 500 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 SLC5A9Q2M3M2 681 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 CKAP2Q8WWK9 683 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 KIAA1683Q9H0B3 1180 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 MARCH7Q9H992 704 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 ELK3P41970 407 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 NAMPTP43490 491 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 PPP2R2BQ00005 443 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 QSOX2Q6ZRP7 698 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 HTRA1Q92743 480 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 IL22Q9GZX6 179 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 VPS45Q9NRW7 570 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 MINPP1Q9UNW1 487 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 SCAF8Q9UPN6 1271 aaKnown RBP9.39□□□□□ -0.91
VPS13A-203ENST00000360280 EIF5AP63241 154 aaKnown RBP9.39□□□□□ -0.91
VPS13A-203ENST00000360280 SPIBQ01892 262 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 TRIM40Q6P9F5 258 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 ILDR2Q71H61 639 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 BHMTQ93088 406 aa9.39□□□□□ -0.91
VPS13A-203ENST00000360280 AHCYL2Q96HN2 611 aaKnown RBP9.39□□□□□ -0.91
VPS13A-203ENST00000360280 UNKQ9C0B0 810 aaKnown RBP9.39□□□□□ -0.91
VPS13A-203ENST00000360280 ITGA11Q9UKX5 1188 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms