RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 QKIQ96PU8 341 aaKnown RBP eCLIP18.91■□□□□ 0.62
SNX11-201ENST00000359238 WDCPQ9H6R7 721 aa18.91■□□□□ 0.62
SNX11-201ENST00000359238 CWH43Q9H720 699 aa18.91■□□□□ 0.62
SNX11-201ENST00000359238 TIMMDC1Q9NPL8 285 aa18.91■□□□□ 0.62
SNX11-201ENST00000359238 PLXNA3P51805 1871 aa18.91■□□□□ 0.62
SNX11-201ENST00000359238 CAPN15O75808 1086 aa18.91■□□□□ 0.62
SNX11-201ENST00000359238 LRIG2O94898 1065 aa18.91■□□□□ 0.62
SNX11-201ENST00000359238 CPB1P15086 417 aa18.91■□□□□ 0.62
SNX11-201ENST00000359238 RFC2P35250 354 aa18.91■□□□□ 0.62
SNX11-201ENST00000359238 AQP4P55087 323 aa18.91■□□□□ 0.62
SNX11-201ENST00000359238 CDK18Q07002 472 aa18.91■□□□□ 0.62
SNX11-201ENST00000359238 DLG1Q12959 904 aa18.91■□□□□ 0.62
SNX11-201ENST00000359238 OLIG2Q13516 323 aa18.91■□□□□ 0.62
SNX11-201ENST00000359238 HSF5Q4G112 596 aaPredicted RBP18.91■□□□□ 0.62
SNX11-201ENST00000359238 SPOUT1Q5T280 376 aaKnown RBP18.91■□□□□ 0.62
SNX11-201ENST00000359238 SLC25A41Q8N5S1 370 aa18.91■□□□□ 0.62
SNX11-201ENST00000359238 ZNF513Q8N8E2 541 aaPredicted RBP18.91■□□□□ 0.62
SNX11-201ENST00000359238 FBXO36Q8NEA4 188 aa18.91■□□□□ 0.62
SNX11-201ENST00000359238 TOP1MTQ969P6 601 aa18.91■□□□□ 0.62
SNX11-201ENST00000359238 FAM111AQ96PZ2 611 aa18.91■□□□□ 0.62
SNX11-201ENST00000359238 BTBD9Q96Q07 612 aa18.91■□□□□ 0.62
SNX11-201ENST00000359238 CCDC106Q9BWC9 280 aa18.91■□□□□ 0.62
SNX11-201ENST00000359238 WWP1Q9H0M0 922 aa18.91■□□□□ 0.62
SNX11-201ENST00000359238 PRDM12Q9H4Q4 367 aa18.91■□□□□ 0.62
SNX11-201ENST00000359238 PIH1D1Q9NWS0 290 aaKnown RBP18.91■□□□□ 0.62
SNX11-201ENST00000359238 NEU3Q9UQ49 428 aa18.91■□□□□ 0.62
SNX11-201ENST00000359238 hCG_2014768A0A024R1R8 64 aa18.9■□□□□ 0.62
SNX11-201ENST00000359238 A0A088AWK7 358 aa18.9■□□□□ 0.62
SNX11-201ENST00000359238 TBX18O95935 607 aa18.9■□□□□ 0.62
SNX11-201ENST00000359238 SLC18A2Q05940 514 aa18.9■□□□□ 0.62
SNX11-201ENST00000359238 TBL3Q12788 808 aaKnown RBP18.9■□□□□ 0.62
SNX11-201ENST00000359238 CYLC2Q14093 348 aaPredicted RBP18.9■□□□□ 0.62
SNX11-201ENST00000359238 RBM44Q6ZP01 1051 aaKnown RBP18.9■□□□□ 0.62
SNX11-201ENST00000359238 C3orf62Q6ZUJ4 267 aa18.9■□□□□ 0.62
SNX11-201ENST00000359238 OTOP2Q7RTS6 562 aa18.9■□□□□ 0.62
SNX11-201ENST00000359238 PRPF39Q86UA1 669 aaKnown RBP18.9■□□□□ 0.62
SNX11-201ENST00000359238 TRIM42Q8IWZ5 723 aa18.9■□□□□ 0.62
SNX11-201ENST00000359238 NTAN1Q96AB6 310 aa18.9■□□□□ 0.62
SNX11-201ENST00000359238 C7orf26Q96N11 449 aa18.9■□□□□ 0.62
SNX11-201ENST00000359238 SIK2Q9H0K1 926 aa18.9■□□□□ 0.62
SNX11-201ENST00000359238 PLAC1Q9HBJ0 212 aa18.9■□□□□ 0.62
SNX11-201ENST00000359238 OR12D3Q9UGF7 316 aa18.9■□□□□ 0.62
SNX11-201ENST00000359238 KCNK1O00180 336 aa18.9■□□□□ 0.62
SNX11-201ENST00000359238 APRTP07741 180 aa18.9■□□□□ 0.62
SNX11-201ENST00000359238 SCAPQ12770 1279 aa18.9■□□□□ 0.62
SNX11-201ENST00000359238 LPCAT4Q643R3 524 aa18.9■□□□□ 0.62
SNX11-201ENST00000359238 RNF111Q6ZNA4 994 aa18.9■□□□□ 0.62
SNX11-201ENST00000359238 ZNF534Q76KX8 674 aa18.9■□□□□ 0.62
SNX11-201ENST00000359238 PCGF5Q86SE9 256 aa18.9■□□□□ 0.62
SNX11-201ENST00000359238 CAND1Q86VP6 1230 aaKnown RBP18.9■□□□□ 0.62
SNX11-201ENST00000359238 GDPD5Q8WTR4 605 aa18.9■□□□□ 0.62
SNX11-201ENST00000359238 DNAJC1Q96KC8 554 aaKnown RBP18.9■□□□□ 0.62
SNX11-201ENST00000359238 PNPLA8Q9NP80 782 aa18.9■□□□□ 0.62
SNX11-201ENST00000359238 E7ESA3 106 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 ADARP55265 1226 aaKnown RBP18.89■□□□□ 0.61
SNX11-201ENST00000359238 WDR5P61964 334 aaKnown RBP18.89■□□□□ 0.61
SNX11-201ENST00000359238 MTA1Q13330 715 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 LRRC36Q1X8D7 754 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 DENND5BQ6ZUT9 1274 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 P2RY11Q96G91 374 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 SLC9A7Q96T83 725 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 TTPALQ9BTX7 342 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 NDFIP2Q9NV92 336 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 ADAMTS6Q9UKP5 1117 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 IQANK1A0A1B0GTG1 560 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 ABHD14A-ACY1A0A1B0GW23 586 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 KIAA0355O15063 1070 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 IRAK2O43187 625 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 PEX1O43933 1283 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 SRGAP2BP0DMP2 458 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 TSHRP16473 764 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 EN2P19622 333 aaPredicted RBP18.89■□□□□ 0.61
SNX11-201ENST00000359238 CPOXP36551 454 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 ELK3P41970 407 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 TPI1P60174 286 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 NFE2Q16621 373 aaPredicted RBP18.89■□□□□ 0.61
SNX11-201ENST00000359238 KLHDC10Q6PID8 442 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 SH2D5Q6ZV89 423 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 MPP5Q8N3R9 675 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 HTR3CQ8WXA8 447 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 PYDC1Q8WXC3 89 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 CELF6Q96J87 481 aaKnown RBP18.89■□□□□ 0.61
SNX11-201ENST00000359238 SEPT10Q9P0V9 454 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 GMIPQ9P107 970 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 SOX13Q9UN79 622 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 PCDHB5Q9Y5E4 795 aa18.89■□□□□ 0.61
SNX11-201ENST00000359238 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.88■□□□□ 0.61
SNX11-201ENST00000359238 C15orf38-AP3S2A0A0A6YYH1 394 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 MTMR11A4FU01 709 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 TBC1D4O60343 1298 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 PGM3O95394 542 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 CDK4P11802 303 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 CLCN2P51788 898 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 IRX4P78413 519 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 PDE1BQ01064 536 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 WASHC5Q12768 1159 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 ELAVL2Q12926 359 aaKnown RBP18.88■□□□□ 0.61
SNX11-201ENST00000359238 HSP90AA5PQ58FG0 334 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 BTBD8Q5XKL5 378 aa18.88■□□□□ 0.61
SNX11-201ENST00000359238 HEATR6Q6AI08 1181 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms