RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 UNC93B1Q9H1C4 597 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 PCDHA11Q9Y5I1 949 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 TROAPQ12815 778 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 KYAT1Q16773 422 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 ZNF410Q86VK4 478 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 PNMA5Q96PV4 448 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 MALRD1Q5VYJ5 2156 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 FAM149AA5PLN7 773 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 NR6A1Q15406 480 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 SPRED3Q2MJR0 410 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 SBK1Q52WX2 424 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 XKR5Q6UX68 686 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 SEMA4DQ92854 862 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 RMDN3Q96TC7 470 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 KIFC1Q9BW19 673 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 ERVK-5Q9HDB9 667 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 FEM1BQ9UK73 627 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 DGAT1O75907 488 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 FBXO21O94952 628 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 CYP2C9P11712 490 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 CCNCP24863 283 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 TGFBR2P37173 567 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 STT3AP46977 705 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 FAM9CQ8IZT9 166 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 STARD8Q92502 1023 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 NPAS2Q99743 824 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 OR2B2Q9GZK3 357 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 C2orf40Q9H1Z8 148 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 ZNF302Q9NR11 478 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 SLC7A8Q9UHI5 535 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 POLG2Q9UHN1 485 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 BBIP1A8MTZ0 92 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 FAM220BPB1ANY3 271 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 SNAPC5O75971 98 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 GPD2P43304 727 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 THOP1P52888 689 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 ATP12AP54707 1039 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 MYL6P60660 151 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 ERFEQ4G0M1 354 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 ANKS3Q6ZW76 656 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 DEPDC4Q8N2C3 294 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 USP18Q9UMW8 372 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 ABCG2Q9UNQ0 655 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 C12orf71A8MTZ7 269 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 TRAFD1O14545 582 aaPredicted RBP6.14□□□□□ -1.43
VPS13B-203ENST00000358544 SERPINA1P01009 418 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 LTA4HP09960 611 aaKnown RBP6.14□□□□□ -1.43
VPS13B-203ENST00000358544 RPS7P62081 194 aaKnown RBP6.14□□□□□ -1.43
VPS13B-203ENST00000358544 HGSNATQ68CP4 663 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 ELMOD2Q8IZ81 293 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 SPAG16Q8N0X2 631 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 CENPIQ92674 756 aaPredicted RBP6.14□□□□□ -1.43
VPS13B-203ENST00000358544 TRNT1Q96Q11 434 aaKnown RBP6.14□□□□□ -1.43
VPS13B-203ENST00000358544 GDAP2Q9NXN4 497 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 TCF3P15923 654 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 GSTM5P46439 218 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 IDH2P48735 452 aaKnown RBP6.14□□□□□ -1.43
VPS13B-203ENST00000358544 TMEM143Q96AN5 459 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 TMCO6Q96DC7 493 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 TOR4AQ9NXH8 423 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 TBC1D14Q9P2M4 693 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 FBXO40Q9UH90 709 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 RAP2CQ9Y3L5 183 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 MAGEB16A2A368 324 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 NCF1BA6NI72 391 aaPredicted RBP6.14□□□□□ -1.43
VPS13B-203ENST00000358544 NCF1CA8MVU1 366 aaPredicted RBP6.14□□□□□ -1.43
VPS13B-203ENST00000358544 APOC4-APOC2K7ER74 178 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 PRAMEF1O95521 474 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 APOC2P02655 101 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 NCF1P14598 390 aaPredicted RBP6.14□□□□□ -1.43
VPS13B-203ENST00000358544 ASRGL1Q7L266 308 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 ISCA1Q9BUE6 129 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 CAB39LQ9H9S4 337 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.14□□□□□ -1.431e-6■■□□□ 13.9
VPS13B-203ENST00000358544 LEF1Q9UJU2 399 aaPredicted RBP6.14□□□□□ -1.43
VPS13B-203ENST00000358544 CLTCL1P53675 1640 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 SPHKAPQ2M3C7 1700 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 ZNF99A8MXY4 864 aaPredicted RBP6.14□□□□□ -1.43
VPS13B-203ENST00000358544 AKAP5P24588 427 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 RBP5P82980 135 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 CES3Q6UWW8 571 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 DSELQ8IZU8 1212 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 ZNF671Q8TAW3 534 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 KBTBD7Q8WVZ9 684 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 ZC3H10Q96K80 434 aaKnown RBP6.14□□□□□ -1.43
VPS13B-203ENST00000358544 LATS2Q9NRM7 1088 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 RAD54BQ9Y620 910 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 UBAP1LF5GYI3 381 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 MYL12AP19105 171 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 WARSP23381 471 aaKnown RBP6.14□□□□□ -1.43
VPS13B-203ENST00000358544 PRDX5P30044 214 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 GRIA4P48058 902 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 CCNA1P78396 465 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 SEC23AQ15436 765 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 TBL1YQ9BQ87 522 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 YIPF2Q9BWQ6 316 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 SLAIN2Q9P270 581 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 CPNE3O75131 537 aaKnown RBP6.13□□□□□ -1.43
VPS13B-203ENST00000358544 PMPCBO75439 489 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 YES1P07947 543 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms