RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 TAPT1Q6NXT6 567 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 LSMEM2Q8N112 164 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 FSTL5Q8N475 847 aaPredicted RBP17.96■□□□□ 0.47
RTN4-204ENST00000357732 AFAP1L2Q8N4X5 818 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 GFM2Q969S9 779 aaKnown RBP17.96■□□□□ 0.47
RTN4-204ENST00000357732 MRPL1Q9BYD6 325 aaKnown RBP17.96■□□□□ 0.47
RTN4-204ENST00000357732 TUT1Q9H6E5 874 aaKnown RBP17.96■□□□□ 0.47
RTN4-204ENST00000357732 CHRAC1Q9NRG0 131 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 FBXW11Q9UKB1 542 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 SARDHQ9UL12 918 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 TCAF2A6NFQ2 919 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 CACNG3O60359 315 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 KCNE1P15382 129 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 TKTP29401 623 aaKnown RBP17.95■□□□□ 0.46
RTN4-204ENST00000357732 GTF2A2P52657 109 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 RAB10P61026 200 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 NME3Q13232 169 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 PTK2BQ14289 1009 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 XKR4Q5GH76 650 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 MARCH8Q5T0T0 291 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 KLC3Q6P597 504 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 MAMDC4Q6UXC1 1216 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 CATSPER4Q7RTX7 472 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 SULF1Q8IWU6 871 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 KDM1BQ8NB78 822 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 SCYL1Q96KG9 808 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 CNBD2Q96M20 576 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 CATSPER2Q96P56 530 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 PKP2Q99959 881 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 MRPL46Q9H2W6 279 aaKnown RBP17.95■□□□□ 0.46
RTN4-204ENST00000357732 ADAMTS10Q9H324 1103 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 RUVBL2Q9Y230 463 aaKnown RBP17.95■□□□□ 0.46
RTN4-204ENST00000357732 AAR2Q9Y312 384 aaKnown RBP17.95■□□□□ 0.46
RTN4-204ENST00000357732 COPG1Q9Y678 874 aaKnown RBP17.95■□□□□ 0.46
RTN4-204ENST00000357732 RECQL4O94761 1208 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 VAPBO95292 243 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 F9P00740 461 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 NFKB1P19838 968 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 PITX1P78337 314 aaPredicted RBP17.95■□□□□ 0.46
RTN4-204ENST00000357732 COG7P83436 770 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 TXNL4AP83876 142 aaKnown RBP17.95■□□□□ 0.46
RTN4-204ENST00000357732 OLIG2Q13516 323 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 TTLL12Q14166 644 aaPredicted RBP17.95■□□□□ 0.46
RTN4-204ENST00000357732 PSMD5Q16401 504 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 GLRA4Q5JXX5 417 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 CHSY3Q70JA7 882 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 PELI3Q8N2H9 469 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 METTL25Q8N6Q8 603 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 NETO2Q8NC67 525 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 RNF217Q8TC41 542 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 DCPSQ96C86 337 aaKnown RBP17.95■□□□□ 0.46
RTN4-204ENST00000357732 CCDC126Q96EE4 140 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 UNC93B1Q9H1C4 597 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 WDR6Q9NNW5 1121 aaKnown RBP17.95■□□□□ 0.46
RTN4-204ENST00000357732 SQORQ9Y6N5 450 aa17.95■□□□□ 0.46
RTN4-204ENST00000357732 A0A087X1B8 175 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 RRN3P2A6NIE6 340 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 YBX3P16989 372 aaKnown RBP eCLIP17.94■□□□□ 0.462e-23■□□□□ 9.5
RTN4-204ENST00000357732 PSMC3P17980 439 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 ITGA7Q13683 1181 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 TRIM25Q14258 630 aaKnown RBP17.94■□□□□ 0.46
RTN4-204ENST00000357732 SMAD1Q15797 465 aaKnown RBP17.94■□□□□ 0.46
RTN4-204ENST00000357732 PCID2Q5JVF3 399 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 NXNQ6DKJ4 435 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 CENPLQ8N0S6 344 aaPredicted RBP17.94■□□□□ 0.46
RTN4-204ENST00000357732 TRPC4APQ8TEL6 797 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 ZNF597Q96LX8 424 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 TSGA13Q96PP4 275 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 MRPL57Q9BQC6 102 aaKnown RBP17.94■□□□□ 0.46
RTN4-204ENST00000357732 OSBPL11Q9BXB4 747 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 SENP6Q9GZR1 1112 aaPredicted RBP17.94■□□□□ 0.46
RTN4-204ENST00000357732 GINS2Q9Y248 185 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 HES2Q9Y543 173 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 GMEB1Q9Y692 573 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 NRCAMQ92823 1304 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 SBF1O95248 1867 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 SPTLC1O15269 473 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 CFLARO15519 480 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 DLX3O60479 287 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 DDNO94850 711 aaPredicted RBP17.94■□□□□ 0.46
RTN4-204ENST00000357732 HOXD8P13378 290 aaPredicted RBP17.94■□□□□ 0.46
RTN4-204ENST00000357732 NMBRP28336 390 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 DPP6P42658 865 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 PKNOX1P55347 436 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 SYPL2Q5VXT5 272 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 NLGN2Q8NFZ4 835 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 DPF3Q92784 378 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 PRPF18Q99633 342 aaKnown RBP17.94■□□□□ 0.46
RTN4-204ENST00000357732 APBA2Q99767 749 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 EIF2AQ9BY44 585 aaKnown RBP17.94■□□□□ 0.46
RTN4-204ENST00000357732 TMPRSS4Q9NRS4 437 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 KCNH4Q9UQ05 1017 aa17.94■□□□□ 0.46
RTN4-204ENST00000357732 SMIM28A0A1B0GU29 152 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 STMN1P16949 149 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 ZNF26P17031 533 aaPredicted RBP17.93■□□□□ 0.46
RTN4-204ENST00000357732 RHDQ02161 417 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 TMEM62Q0P6H9 643 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 ZBTB17Q13105 803 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 PKN3Q6P5Z2 889 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 CHERPQ8IWX8 916 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms