RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 PRAMEF19Q5SWL8 479 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 MZT2BQ6NZ67 158 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 SPOCD1Q6ZMY3 1216 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 REXO1L1PQ8IX06 675 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 PRCCQ92733 491 aaPredicted RBP17.43■□□□□ 0.38
COL27A1-201ENST00000356083 BRD9Q9H8M2 597 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 KCND2Q9NZV8 630 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 SCAMP1O15126 338 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 ROPN1BQ9BZX4 212 aaPredicted RBP17.43■□□□□ 0.38
COL27A1-201ENST00000356083 PPCSQ9HAB8 311 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 ROPN1Q9HAT0 212 aaPredicted RBP17.43■□□□□ 0.38
COL27A1-201ENST00000356083 PLEKHA1Q9HB21 404 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 CROTQ9UKG9 612 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 USP20Q9Y2K6 914 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 PCP4L1A6NKN8 68 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 PLGP00747 810 aaPredicted RBP17.43■□□□□ 0.38
COL27A1-201ENST00000356083 SRGNP10124 158 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 HDCP19113 662 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 PIK3CGP48736 1102 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 AGBL2Q5U5Z8 902 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 DNAAF5Q86Y56 855 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 METTL21AQ8WXB1 218 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 IRAK3Q9Y616 596 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 BHMG1C9JSJ3 638 aaPredicted RBP17.43■□□□□ 0.38
COL27A1-201ENST00000356083 CDKL1Q00532 357 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 PCDH1Q08174 1060 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 VIL1P09327 827 aaKnown RBP17.43■□□□□ 0.38
COL27A1-201ENST00000356083 CCNA2P20248 432 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 LRPAP1P30533 357 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 PURAQ00577 322 aaKnown RBP17.43■□□□□ 0.38
COL27A1-201ENST00000356083 PUS10Q3MIT2 529 aaKnown RBP17.43■□□□□ 0.38
COL27A1-201ENST00000356083 CLVS1Q8IUQ0 354 aaPredicted RBP17.43■□□□□ 0.38
COL27A1-201ENST00000356083 ZNF433Q8N7K0 673 aaPredicted RBP17.43■□□□□ 0.38
COL27A1-201ENST00000356083 ADAM2Q99965 735 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 ACAP1Q15027 740 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 CRTC3Q6UUV7 619 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 SLC41A1Q8IVJ1 513 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 CDYL2Q8N8U2 506 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 ANKEF1Q9NU02 776 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 CNOT6Q9ULM6 557 aaKnown RBP17.42■□□□□ 0.38
COL27A1-201ENST00000356083 SPIBQ01892 262 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 NR1I3Q14994 352 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 OAFQ86UD1 273 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 KYQ8NBH2 561 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 ENOPH1Q9UHY7 261 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 TSPAN16Q9UKR8 245 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 IKZF2Q9UKS7 526 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 GNRH1P01148 92 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 CTPS1P17812 591 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 GSDMCQ9BYG8 508 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 SLC27A5Q9Y2P5 690 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 CPSF4LA6NMK7 179 aaKnown RBP17.42■□□□□ 0.38
COL27A1-201ENST00000356083 XKRYO14609 159 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 CLOCKO15516 846 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 GNALP38405 381 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 IZUMO2Q6UXV1 221 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 DEF8Q6ZN54 512 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 PRSS58Q8IYP2 241 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 GPR152Q8TDT2 470 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 FAM151AQ8WW52 585 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 RUSC1Q9BVN2 902 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 TRIM66O15016 1216 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 TMCC2O75069 709 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 ABL2P42684 1182 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 MMP13P45452 471 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 BST2Q10589 180 aaKnown RBP17.42■□□□□ 0.38
COL27A1-201ENST00000356083 C3orf67Q6ZVT6 689 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 SNX20Q7Z614 316 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 RNF31Q96EP0 1072 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 MNTQ99583 582 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 TBL1YQ9BQ87 522 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 FAM192AQ9GZU8 254 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 PSRC1Q6PGN9 363 aaPredicted RBP17.42■□□□□ 0.38
COL27A1-201ENST00000356083 ZCCHC23Q6ZST2 131 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 DHFR2Q86XF0 187 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 ERO1BQ86YB8 467 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 ACTRT2Q8TDY3 377 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 DPF2Q92785 391 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 FEM1CQ96JP0 617 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 MARCH2Q9P0N8 246 aa17.42■□□□□ 0.38
COL27A1-201ENST00000356083 C1QTNF3-AMACRE9PGA6 284 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 OR10H3O60404 316 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 AP1S1P61966 158 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 DGLUCYQ7Z3D6 616 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 GALNT7Q86SF2 657 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 TMEM199Q8N511 208 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 ARHGAP9Q9BRR9 750 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 IKZF3Q9UKT9 509 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 TTC34A8MYJ7 566 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 PCCBP05166 539 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 MTA1Q13330 715 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.41■□□□□ 0.38
COL27A1-201ENST00000356083 FAM129CQ86XR2 697 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 NAXEQ8NCW5 288 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 PLEKHF1Q96S99 279 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 SLC40A1Q9NP59 571 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 RASA1P20936 1047 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 KCNJ5P48544 419 aa17.41■□□□□ 0.38
COL27A1-201ENST00000356083 MANFP55145 182 aaKnown RBP17.41■□□□□ 0.38
COL27A1-201ENST00000356083 FOXM1Q08050 763 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms