RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 WDR55Q9H6Y2 383 aaPredicted RBP14.26□□□□□ -0.13
SREBF1-202ENST00000355815 PCDH12Q9NPG4 1184 aa14.26□□□□□ -0.13
SREBF1-202ENST00000355815 PNMA8BQ9ULN7 279 aaPredicted RBP14.26□□□□□ -0.13
SREBF1-202ENST00000355815 TRIM17Q9Y577 477 aa14.26□□□□□ -0.13
SREBF1-202ENST00000355815 PPP2R3BQ9Y5P8 575 aa14.26□□□□□ -0.13
SREBF1-202ENST00000355815 TRIM43BA6NCK2 446 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 MRASO14807 208 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 MFSD11O43934 449 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 PCSK1P29120 753 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 FDFT1P37268 417 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 BRCC3P46736 316 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 CHRNB3Q05901 458 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 DLG2Q15700 870 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 SOWAHAQ2M3V2 549 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 ANKRD52Q8NB46 1076 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 CALML6Q8TD86 181 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 UBASH3BQ8TF42 649 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 PARVBQ9HBI1 364 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 GBA2Q9HCG7 927 aaPredicted RBP14.25□□□□□ -0.13
SREBF1-202ENST00000355815 GNEQ9Y223 722 aaKnown RBP14.25□□□□□ -0.13
SREBF1-202ENST00000355815 ACTL7BQ9Y614 415 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 UBDO15205 165 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 MT-ND1P03886 318 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 PIRTP0C851 137 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 CSH1P0DML2 217 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 CSH2P0DML3 217 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 PTP4A2Q12974 167 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 POLD3Q15054 466 aaPredicted RBP14.25□□□□□ -0.13
SREBF1-202ENST00000355815 PLCL1Q15111 1095 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 GPR142Q7Z601 462 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 MFSD3Q96ES6 412 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 PCDHGC3Q9UN70 934 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 HBS1LQ9Y450 684 aaKnown RBP14.25□□□□□ -0.13
SREBF1-202ENST00000355815 DGKBQ9Y6T7 804 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 TRIM13O60858 407 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 TADA2AO75478 443 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 SLC5A3P53794 718 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 MAXP61244 160 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 PITX1P78337 314 aaPredicted RBP14.25□□□□□ -0.13
SREBF1-202ENST00000355815 EFEMP1Q12805 493 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 C15orf39Q6ZRI6 1047 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 PQLC1Q8N2U9 271 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 SLC44A1Q8WWI5 657 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 HTRA1Q92743 480 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 MOCOSQ96EN8 888 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 DCUN1D1Q96GG9 259 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 NT5MQ9NPB1 228 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 NDFIP2Q9NV92 336 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 EGFL7Q9UHF1 273 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 ANKRD12Q6UB98 2062 aa14.25□□□□□ -0.13
SREBF1-202ENST00000355815 AHDC1Q5TGY3 1603 aaPredicted RBP14.25□□□□□ -0.13
SREBF1-202ENST00000355815 DDX60LQ5H9U9 1706 aaKnown RBP14.25□□□□□ -0.13
SREBF1-202ENST00000355815 BCORQ6W2J9 1755 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 A0A0A0MRY4 1105 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 SUPT3HB4E1H0 165 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 BTBD19C9JJ37 291 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 CHADO15335 359 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 WFS1O76024 890 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 NFKB1P19838 968 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 ARHGEF6Q15052 776 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 MTX3Q5HYI7 312 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 RHBDF2Q6PJF5 856 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 BBS5Q8N3I7 341 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 SPATA13Q96N96 652 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 DEPDC7Q96QD5 511 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 FRMD8P1Q9BZ68 369 aaPredicted RBP14.24□□□□□ -0.13
SREBF1-202ENST00000355815 NENFQ9UMX5 172 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 KNL1Q8NG31 2342 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.24□□□□□ -0.13
SREBF1-202ENST00000355815 FZD9O00144 591 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 TNFRSF21O75509 655 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 OR6B1O95007 311 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 PCNAP12004 261 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 COX4I1P13073 169 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 SMPD1P17405 629 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 PNPLA4P41247 253 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 GJA8P48165 433 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 ARMC4Q5T2S8 1044 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 C10orf107Q8IVU9 208 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 POC5Q8NA72 575 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 C12orf42Q96LP6 360 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 SLC4A5Q9BY07 1137 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 RHOBTB2Q9BYZ6 727 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 VTA1Q9NP79 307 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 COPG2Q9UBF2 871 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 LOC100506127A0A0U1RQW1 187 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 ABLIM1O14639 778 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 PPARGP37231 505 aaPredicted RBP14.24□□□□□ -0.13
SREBF1-202ENST00000355815 INAQ16352 499 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 C9orf57Q5W0N0 161 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 NAT8LQ8N9F0 302 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 KCTD15Q96SI1 283 aaPredicted RBP14.24□□□□□ -0.13
SREBF1-202ENST00000355815 S100A14Q9HCY8 104 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 TMEM161AQ9NX61 479 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 CCL22O00626 93 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 OR4Q2P0C623 313 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 GP5P40197 560 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 SLC25A11Q02978 314 aaKnown RBP14.24□□□□□ -0.13
SREBF1-202ENST00000355815 WASHC5Q12768 1159 aa14.24□□□□□ -0.13
SREBF1-202ENST00000355815 MADCAM1Q13477 382 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms