RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 UNQ6494/PRO21346Q6UXR6 183 aa17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 PARS2Q7L3T8 475 aaKnown RBP17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 ADAT2Q7Z6V5 191 aaKnown RBP17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 DSG4Q86SJ6 1040 aa17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 GLRX5Q86SX6 157 aa17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 CNPY3Q9BT09 278 aa17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 PCDHGB2Q9Y5G2 931 aa17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 CACNA1BQ00975 2339 aa17.05■□□□□ 0.32
PDLIM7-201ENST00000355572 EPG5Q9HCE0 2579 aa17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 A0A1W2PQU0 124 aa17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 SLC31A1O15431 190 aa17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 FLRT2O43155 660 aa17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 CREB3O43889 395 aa17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 DKK1O94907 266 aa17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 TCF4P15884 667 aa17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 L1CAMP32004 1257 aa17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 CCT8P50990 548 aa17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 DNA2P51530 1060 aa17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 CLDN6P56747 220 aa17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 FANCCQ00597 558 aa17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 ZNF284Q2VY69 593 aa17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 ACBD5Q5T8D3 534 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 KANSL1Q7Z3B3 1105 aa17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 TMC6Q7Z403 805 aa17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 PCDH20Q8N6Y1 951 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 RTL3Q8N8U3 475 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 TMEM145Q8NBT3 493 aa17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 RHBDD1Q8TEB9 315 aa17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 HMCESQ96FZ2 354 aa17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 ELF4Q99607 663 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 KDM4CQ9H3R0 1056 aa17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 ZDHHC6Q9H6R6 413 aa17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 ITM2BQ9Y287 266 aa17.04■□□□□ 0.32
PDLIM7-201ENST00000355572 TMEM191CA6NGB0 347 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 GOLGA8CPA6NN73 597 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 TLR4O00206 839 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 RAD51BO15315 384 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 PCDHGA12O60330 932 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 RAMP2O60895 175 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 ITIH2P19823 946 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 EPHB2P29323 1055 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 C21orf59P57076 290 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 CLDN2P57739 230 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 SFSWAPQ12872 951 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 LRRC73Q5JTD7 316 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 SFMBT2Q5VUG0 894 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 RETSATQ6NUM9 610 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 LRSAM1Q6UWE0 723 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 ERN2Q76MJ5 926 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 TP53INP2Q8IXH6 220 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 SAP25Q8TEE9 199 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 ADAMTS14Q8WXS8 1223 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 KCTD15Q96SI1 283 aaPredicted RBP17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 HEPHQ9BQS7 1158 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 SNRNP25Q9BV90 132 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 CEP44Q9C0F1 390 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 MAGEH1Q9H213 219 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 TMEM51Q9NW97 253 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 LHX3Q9UBR4 397 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 MFHAS1Q9Y4C4 1052 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 PCDHB9Q9Y5E1 797 aa17.03■□□□□ 0.32
PDLIM7-201ENST00000355572 LRP4O75096 1905 aa17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 RASA4BC9J798 803 aa17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 INSIG1O15503 277 aa17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 RASA4O43374 803 aa17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 KDELR3O43731 214 aa17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 FTLP02792 175 aaPredicted RBP17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 PRNPP04156 253 aa17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 CAPNS1P04632 268 aa17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 PROS1P07225 676 aa17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 ADRB3P13945 408 aa17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 PSMA2P25787 234 aa17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 POLD3Q15054 466 aaPredicted RBP17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 TMEM259Q4ZIN3 620 aa17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 EFHC2Q5JST6 749 aa17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 DCUN1D2Q6PH85 259 aa17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 GCNT7Q6ZNI0 430 aa17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 PRPF39Q86UA1 669 aaKnown RBP17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 HDAC8Q9BY41 377 aa17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 PREBQ9HCU5 417 aa17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 CNOT8Q9UFF9 292 aaKnown RBP17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 PCSK1NQ9UHG2 260 aa17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 NEUROG3Q9Y4Z2 214 aa17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 FADS3Q9Y5Q0 445 aa17.02■□□□□ 0.32
PDLIM7-201ENST00000355572 COL27A1Q8IZC6 1860 aaPredicted RBP17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 FAM221BA6H8Z2 402 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 WASH4PA8MWX3 477 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 SDC3O75056 442 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 TMCC1O94876 653 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 SERPINC1P01008 464 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 ITGB7P26010 798 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 IL1R2P27930 398 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 EPHA8P29322 1005 aaPredicted RBP17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 SLC20A2Q08357 652 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 KLHL30Q0D2K2 578 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 CYTH1Q15438 398 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 FILIP1LQ4L180 1135 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 TPRG1LQ5T0D9 272 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 ARHGAP36Q6ZRI8 547 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 HORMAD1Q86X24 394 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms