RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 SBK3P0C264 359 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 GEMP55040 296 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 SLC12A1Q13621 1099 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 MYLK4Q86YV6 388 aaPredicted RBP22.09■■□□□ 1.13
SHMT1-202ENST00000352886 SCN4BQ8IWT1 228 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 CNTN4Q8IWV2 1026 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 PPFIBP2Q8ND30 876 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 SCYL1Q96KG9 808 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 ARHGAP39Q9C0H5 1083 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 ANGPTL2Q9UKU9 493 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 LOC100653049A0A140TA62 436 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 E9PAM4 449 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 ADAMTS4O75173 837 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 KRT34O76011 436 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 PDHA1P08559 390 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 ARNTP27540 789 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 TRIM32Q13049 653 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 UGP2Q16851 508 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 LIPMQ5VYY2 423 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 RDH11Q8TC12 318 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 MICAL1Q8TDZ2 1067 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 OSBPL1AQ9BXW6 950 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 ILKAPQ9H0C8 392 aaPredicted RBP22.09■■□□□ 1.13
SHMT1-202ENST00000352886 ATXN3LQ9H3M9 355 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 SLC2A6Q9UGQ3 507 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 GABRQQ9UN88 632 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 RUVBL2Q9Y230 463 aaKnown RBP22.09■■□□□ 1.13
SHMT1-202ENST00000352886 HS3ST4Q9Y661 456 aa22.09■■□□□ 1.13
SHMT1-202ENST00000352886 A0A1W2PQH9 124 aa22.08■■□□□ 1.13
SHMT1-202ENST00000352886 SEPT4O43236 478 aa22.08■■□□□ 1.13
SHMT1-202ENST00000352886 ZBTB14O43829 449 aa22.08■■□□□ 1.13
SHMT1-202ENST00000352886 ANPEPP15144 967 aa22.08■■□□□ 1.13
SHMT1-202ENST00000352886 TYMPP19971 482 aa22.08■■□□□ 1.13
SHMT1-202ENST00000352886 MPSTP25325 297 aa22.08■■□□□ 1.13
SHMT1-202ENST00000352886 ADRA1AP35348 466 aa22.08■■□□□ 1.13
SHMT1-202ENST00000352886 GRIA4P48058 902 aa22.08■■□□□ 1.13
SHMT1-202ENST00000352886 ARCN1P48444 511 aaKnown RBP22.08■■□□□ 1.13
SHMT1-202ENST00000352886 ZNF460Q14592 562 aa22.08■■□□□ 1.13
SHMT1-202ENST00000352886 KCNA10Q16322 511 aa22.08■■□□□ 1.13
SHMT1-202ENST00000352886 TIGD7Q6NT04 549 aaPredicted RBP22.08■■□□□ 1.13
SHMT1-202ENST00000352886 C14orf80Q86SX3 495 aa22.08■■□□□ 1.13
SHMT1-202ENST00000352886 ENTPD7Q9NQZ7 604 aa22.08■■□□□ 1.13
SHMT1-202ENST00000352886 TCAF1Q9Y4C2 921 aa22.08■■□□□ 1.13
SHMT1-202ENST00000352886 MIA3Q5JRA6 1907 aa22.08■■□□□ 1.12
SHMT1-202ENST00000352886 SMNDC1O75940 238 aaKnown RBP eCLIP22.08■■□□□ 1.12
SHMT1-202ENST00000352886 NEBLO76041 1014 aa22.08■■□□□ 1.12
SHMT1-202ENST00000352886 PAPOLAP51003 745 aaKnown RBP22.08■■□□□ 1.12
SHMT1-202ENST00000352886 AP2B1P63010 937 aa22.08■■□□□ 1.12
SHMT1-202ENST00000352886 PEX6Q13608 980 aa22.08■■□□□ 1.12
SHMT1-202ENST00000352886 SLC39A12Q504Y0 691 aa22.08■■□□□ 1.12
SHMT1-202ENST00000352886 FSCBQ5H9T9 825 aa22.08■■□□□ 1.12
SHMT1-202ENST00000352886 POTEHQ6S545 545 aa22.08■■□□□ 1.12
SHMT1-202ENST00000352886 CENPLQ8N0S6 344 aaPredicted RBP22.08■■□□□ 1.12
SHMT1-202ENST00000352886 FSTL5Q8N475 847 aaPredicted RBP22.08■■□□□ 1.12
SHMT1-202ENST00000352886 RTL3Q8N8U3 475 aaKnown RBP22.08■■□□□ 1.12
SHMT1-202ENST00000352886 OR52B2Q96RD2 323 aa22.08■■□□□ 1.12
SHMT1-202ENST00000352886 CYP4F11Q9HBI6 524 aa22.08■■□□□ 1.12
SHMT1-202ENST00000352886 ARHGEF37A1IGU5 675 aa22.07■■□□□ 1.12
SHMT1-202ENST00000352886 CABYRO75952 493 aa22.07■■□□□ 1.12
SHMT1-202ENST00000352886 PAX3P23760 479 aa22.07■■□□□ 1.12
SHMT1-202ENST00000352886 CCR10P46092 362 aa22.07■■□□□ 1.12
SHMT1-202ENST00000352886 CNGA3Q16281 694 aa22.07■■□□□ 1.12
SHMT1-202ENST00000352886 FRMD7Q6ZUT3 714 aa22.07■■□□□ 1.12
SHMT1-202ENST00000352886 CEP97Q8IW35 865 aa22.07■■□□□ 1.12
SHMT1-202ENST00000352886 DRC3Q9H069 523 aa22.07■■□□□ 1.12
SHMT1-202ENST00000352886 TCF7L2Q9NQB0 619 aa22.07■■□□□ 1.12
SHMT1-202ENST00000352886 OSER1Q9NX31 292 aa22.07■■□□□ 1.12
SHMT1-202ENST00000352886 ABI2Q9NYB9 513 aaPredicted RBP22.07■■□□□ 1.12
SHMT1-202ENST00000352886 KCNU1A8MYU2 1149 aa22.07■■□□□ 1.12
SHMT1-202ENST00000352886 MAP3K7O43318 606 aa22.07■■□□□ 1.12
SHMT1-202ENST00000352886 CHRNA4P43681 627 aa22.07■■□□□ 1.12
SHMT1-202ENST00000352886 EPHB1P54762 984 aa22.07■■□□□ 1.12
SHMT1-202ENST00000352886 ZRSR2Q15696 482 aaKnown RBP22.07■■□□□ 1.12
SHMT1-202ENST00000352886 RGMBQ6NW40 437 aa22.07■■□□□ 1.12
SHMT1-202ENST00000352886 CCDC117Q8IWD4 279 aaPredicted RBP22.07■■□□□ 1.12
SHMT1-202ENST00000352886 MFSD6LQ8IWD5 586 aa22.07■■□□□ 1.12
SHMT1-202ENST00000352886 MRGPRX2Q96LB1 330 aa22.07■■□□□ 1.12
SHMT1-202ENST00000352886 TRPV6Q9H1D0 765 aa22.07■■□□□ 1.12
SHMT1-202ENST00000352886 ACOT9Q9Y305 439 aa22.07■■□□□ 1.12
SHMT1-202ENST00000352886 RAP2CQ9Y3L5 183 aa22.07■■□□□ 1.12
SHMT1-202ENST00000352886 GOLGA8QA0A0J9YX86 632 aa22.06■■□□□ 1.12
SHMT1-202ENST00000352886 FAM95CA0A1B0GW59 222 aa22.06■■□□□ 1.12
SHMT1-202ENST00000352886 GOLGA8OA6NCC3 632 aa22.06■■□□□ 1.12
SHMT1-202ENST00000352886 GOLGA8NF8WBI6 632 aa22.06■■□□□ 1.12
SHMT1-202ENST00000352886 MATN2O00339 956 aa22.06■■□□□ 1.12
SHMT1-202ENST00000352886 B4GALT3O60512 393 aa22.06■■□□□ 1.12
SHMT1-202ENST00000352886 ZMPSTE24O75844 475 aa22.06■■□□□ 1.12
SHMT1-202ENST00000352886 DDHD2O94830 711 aa22.06■■□□□ 1.12
SHMT1-202ENST00000352886 SLC1A2P43004 574 aa22.06■■□□□ 1.12
SHMT1-202ENST00000352886 NAGLUP54802 743 aa22.06■■□□□ 1.12
SHMT1-202ENST00000352886 RAB10P61026 200 aa22.06■■□□□ 1.12
SHMT1-202ENST00000352886 CUL3Q13618 768 aa22.06■■□□□ 1.12
SHMT1-202ENST00000352886 ARL13AQ5H913 290 aaPredicted RBP22.06■■□□□ 1.12
SHMT1-202ENST00000352886 SDHAF4Q5VUM1 108 aa22.06■■□□□ 1.12
SHMT1-202ENST00000352886 AFMIDQ63HM1 303 aa22.06■■□□□ 1.12
SHMT1-202ENST00000352886 LRRC8EQ6NSJ5 796 aa22.06■■□□□ 1.12
SHMT1-202ENST00000352886 LCA5Q86VQ0 697 aa22.06■■□□□ 1.12
SHMT1-202ENST00000352886 STYXQ8WUJ0 223 aa22.06■■□□□ 1.12
SHMT1-202ENST00000352886 PPP1R36Q96LQ0 422 aa22.06■■□□□ 1.12
SHMT1-202ENST00000352886 SERPINB11Q96P15 392 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms